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Report for CCDS12720.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12720.1 Public Homo sapiens 19 GRWD1 24 110 108 CCDS HistoryNCBI Gene:83743Re-query CCDS DB by CCDS ID:12720.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12720.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000253237.10 ENSP00000253237.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000253237.10Link to Ensembl Protein Viewer:ENSP00000253237.4Re-query CCDS DB by Nucleotide ID:ENST00000253237Re-query CCDS DB by Protein ID:ENSP00000253237
Original member Current member NCBI NM_031485.4 NP_113673.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_031485.4Link to Protein Sequence:NP_113673.3Re-query CCDS DB by Nucleotide ID:NM_031485Re-query CCDS DB by Protein ID:NP_113673Link to BLAST:NP_113673.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_113673.3 446 Q9BQ67 446 100% 0 0

Chromosomal Locations for CCDS 12720.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 48446006 48446192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48446385 48446502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48446681 48446843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48450313 48450526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48450666 48450808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48451034 48451231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48452708 48453025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1341 nt):
ATGGCGGCGCGCAAGGGTCGGCGGCGCACGTGTGAAACCGGGGAACCCATGGAAGCCGAGTCCGGCGACA
CAAGTTCCGAGGGCCCGGCCCAGGTCTACCTGCCCGGCCGGGGGCCGCCGCTACGCGAAGGGGAGGAGCT
GGTCATGGACGAGGAGGCCTATGTGCTCTACCACCGAGCGCAGACTGGCGCCCCCTGTCTCAGCTTTGAC
ATAGTCCGGGATCACCTGGGAGACAACCGGACAGAGCTTCCTCTTACACTTTACTTGTGTGCTGGGACCC
AGGCTGAGAGCGCCCAGAGCAACAGACTGATGATGCTTCGGATGCACAATCTGCATGGGACAAAGCCCCC
ACCCTCAGAGGGCAGTGATGAAGAAGAAGAGGAGGAAGATGAAGAGGATGAAGAAGAGCGGAAACCTCAG
CTGGAGCTGGCCATGGTGCCCCACTATGGTGGCATCAACCGAGTTCGGGTGTCATGGCTGGGTGAAGAGC
CTGTGGCTGGGGTGTGGTCAGAGAAGGGCCAGGTGGAGGTGTTTGCGCTGCGGCGGCTTCTGCAGGTGGT
GGAGGAGCCCCAGGCCCTGGCAGCCTTCCTCCGGGATGAGCAGGCCCAAATGAAGCCCATCTTCTCCTTC
GCTGGACACATGGGCGAGGGCTTTGCCCTTGACTGGTCCCCCCGGGTGACCGGTCGCCTGCTGACCGGTG
ACTGTCAAAAGAACATCCACCTCTGGACACCTACGGACGGCGGCTCCTGGCACGTGGACCAGCGGCCATT
CGTGGGCCACACACGCTCTGTGGAGGACCTGCAGTGGTCACCGACTGAGAACACGGTGTTTGCCTCCTGC
TCAGCTGACGCCTCCATCCGCATCTGGGACATCCGGGCAGCCCCCAGCAAGGCCTGCATGCTCACCACAG
CCACCGCCCATGATGGGGACGTCAATGTCATCAGCTGGAGCCGCCGGGAGCCCTTCCTGCTCAGTGGCGG
GGATGATGGGGCCCTCAAGATCTGGGACCTTCGGCAGTTCAAGTCTGGTTCCCCAGTGGCCACCTTCAAG
CAGCACGTGGCCCCCGTGACCTCCGTCGAGTGGCACCCCCAGGACAGCGGGGTCTTTGCAGCCTCGGGTG
CAGACCACCAGATCACACAGTGGGACCTGGCAGTGGAGCGGGACCCTGAGGCGGGCGACGTGGAGGCCGA
CCCCGGACTGGCCGACCTCCCGCAGCAGCTGCTGTTCGTGCACCAGGGCGAGACCGAGCTGAAGGAGCTG
CACTGGCACCCGCAGTGCCCAGGGCTCCTGGTCAGCACGGCGCTGTCAGGCTTCACCATCTTCCGCACCA
TCAGCGTCTGA

Translation (446 aa):
MAARKGRRRTCETGEPMEAESGDTSSEGPAQVYLPGRGPPLREGEELVMDEEAYVLYHRAQTGAPCLSFD
IVRDHLGDNRTELPLTLYLCAGTQAESAQSNRLMMLRMHNLHGTKPPPSEGSDEEEEEEDEEDEEERKPQ
LELAMVPHYGGINRVRVSWLGEEPVAGVWSEKGQVEVFALRRLLQVVEEPQALAAFLRDEQAQMKPIFSF
AGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHVDQRPFVGHTRSVEDLQWSPTENTVFASC
SADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWSRREPFLLSGGDDGALKIWDLRQFKSGSPVATFK
QHVAPVTSVEWHPQDSGVFAASGADHQITQWDLAVERDPEAGDVEADPGLADLPQQLLFVHQGETELKEL
HWHPQCPGLLVSTALSGFTIFRTISV


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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