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Report for CCDS14918.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14918.1 Public Mus musculus 1 Mrps9 23 108 98 CCDS HistoryNCBI Gene:69527Re-query CCDS DB by CCDS ID:14918.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 14918.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000057208.12 ENSMUSP00000056855.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000057208.12Link to Ensembl Protein Viewer:ENSMUSP00000056855.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000057208Re-query CCDS DB by Protein ID:ENSMUSP00000056855
Original member Current member NCBI NM_023514.4 NP_076003.3 Accepted alive Link to Nucleotide Sequence:NM_023514.4Link to Protein Sequence:NP_076003.3Re-query CCDS DB by Nucleotide ID:NM_023514Re-query CCDS DB by Protein ID:NP_076003Link to BLAST:NP_076003.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_076003.3 390 Q9D7N3 390 100% 0 0

Chromosomal Locations for CCDS 14918.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 42851292 42851426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 42862469 42862648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 42879755 42879817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 42879896 42879926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 42887707 42887786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 42895350 42895417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 42896093 42896168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 42898440 42898608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 42899441 42899549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 42903295 42903464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 42905405 42905496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1173 nt):
ATGGCCGCCCCCTGTGTGTCCTGCGGCCGAGTGCTTTCCCTTTGGTTCACTCCCGCTGTTAGAGCTAGCC
TCTGCCAGAGGCCCGGGTACTGGACAGCCTCGGCGGTTGGCTGGCAGACAGGGACCAGGTTCCAGCTATC
AAAGCTAATACATACCACAGTTGTAACAACAAAGAAAAATGTCCAAGCCTCAAGACAGGAATCATATACA
GAAGATTTTATTAAAAAGCAGATTGAAGAATTCAATATAGGGAAGAGGCACTTAGCCAACATGATGGGAG
AAGACCCGGAAACTTTTGCTGAAGAGGATATTGATAGAGCTATTGCTTACCTTTTTCCAAGTGGTTTGTT
TGAGAAGCGAGCCAGGCCAATGATGAAGCATCCTGAACATATTTTTCCAAAACAAAGAGCAACCCAGTGG
GGAGAAGATGGCCGTCCATTTCATTTTCTCTTCTATACTGGCAAACAATCGTACTATTCATTAATGCACG
ACGTGTATGGAAAGGTCATGCAGCTGGAAAAGCACAGAGGGCCACTGTCGGCAAGCGCTGAGTCCAGAGA
CCTGATTGGCAGCAGATGGCTGATTAAGGAGGAACTAGAAGAAATGTTAGTGGAAAAACTGTCAGATGAA
GATTATGCACAGTTCATCCGACTGCTCGAGAAGCTATTGACATTGCCGTGCGGGCCTGCAGAAGAAGAAT
TTGTGCAGAGGTTCCGCAGAAGTGTAACTATTCAATCAAAAAAGCAACTGATTGAACCCGTGCAGTATGA
CGAGCAGGGCATGGCCTTCAGCACCAGCGAAGGCCGGAGGAAGAGCGCCACGGCACAGGCGGTCGTTTAT
GAGCACGGAAGCGGGAAGATCCACGTGAACGGAGTTGATTATCTAATTTACTTTCCCATCACACAGGACA
GAGAACAGTTGATGTTCCCTTTCCACTTCCTGGACCGGCTGGAGAGACACGATGTGACCTGCACAGTCTC
CGGGGGAGGGAGGTCAGCGCAGGCAGGCGCCATACGCTTGGCGATGGCCAGAGCTTTGTGCAGCTTCGTC
ACTGAGGATGAGGTCGAGTGGATGAGACAAGCCGGACTACTTACCCCTGATCCTCGGATCAGAGAACGGA
AGAAGCCAGGCCAGGAGGGTGCTCGAAGAAAGTTCACCTGGAAGAAGCGCTGA

Translation (390 aa):
MAAPCVSCGRVLSLWFTPAVRASLCQRPGYWTASAVGWQTGTRFQLSKLIHTTVVTTKKNVQASRQESYT
EDFIKKQIEEFNIGKRHLANMMGEDPETFAEEDIDRAIAYLFPSGLFEKRARPMMKHPEHIFPKQRATQW
GEDGRPFHFLFYTGKQSYYSLMHDVYGKVMQLEKHRGPLSASAESRDLIGSRWLIKEELEEMLVEKLSDE
DYAQFIRLLEKLLTLPCGPAEEEFVQRFRRSVTIQSKKQLIEPVQYDEQGMAFSTSEGRRKSATAQAVVY
EHGSGKIHVNGVDYLIYFPITQDREQLMFPFHFLDRLERHDVTCTVSGGGRSAQAGAIRLAMARALCSFV
TEDEVEWMRQAGLLTPDPRIRERKKPGQEGARRKFTWKKR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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