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Report for CCDS51276.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51276.1 Public Mus musculus 4 P3r3urf 23 108 98 CCDS HistoryNCBI Gene:67323Re-query CCDS DB by CCDS ID:51276.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51276.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000106492.2 ENSMUSP00000102101.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106492.2Link to Ensembl Protein Viewer:ENSMUSP00000102101.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000106492Re-query CCDS DB by Protein ID:ENSMUSP00000102101
Original member Current member NCBI NM_001099295.2 NP_001092765.1 Accepted alive Link to Nucleotide Sequence:NM_001099295.2Link to Protein Sequence:NP_001092765.1Re-query CCDS DB by Nucleotide ID:NM_001099295Re-query CCDS DB by Protein ID:NP_001092765Link to BLAST:NP_001092765.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001092765.1 90 B1AUF7 90 100% 0 0

Chromosomal Locations for CCDS 51276.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 116173401 116173629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116174164 116174207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (273 nt):
ATGGGGCCTTCTCAGCTTGTTCGAGCCCCTCGGCCTCCGGGCTTGACTTCTCCCTACCGAAGGCCAGGGA
TGGGTGGGCCCAGGCGCCGGTGTCCCAGTATGTTCAAGTGTAGCCGCAGGACATACCGGCAGAAACCCCG
AGGCCCAACTGCCACCAATCCTGCCTCTGAGGCCACAAACATCAGTGACACGGACACTACCACCAGTGTA
TTGATTCTGTCACCTCGAGTTCTCAGATTTCTCTGTCAACCTGGGGGCTTTCTGGTCCTCTAG

Translation (90 aa):
MGPSQLVRAPRPPGLTSPYRRPGMGGPRRRCPSMFKCSRRTYRQKPRGPTATNPASEATNISDTDTTTSV
LILSPRVLRFLCQPGGFLVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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