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Report for CCDS92082.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92082.1 Public Homo sapiens 16 CCDC154 24 110 108 CCDS HistoryNCBI Gene:645811Re-query CCDS DB by CCDS ID:92082.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92082.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000389176.4 ENSP00000373828.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000389176.4Link to Ensembl Protein Viewer:ENSP00000373828.4Re-query CCDS DB by Nucleotide ID:ENST00000389176Re-query CCDS DB by Protein ID:ENSP00000373828
Original member Current member NCBI NM_001143980.3 NP_001137452.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001143980.3Link to Protein Sequence:NP_001137452.1Re-query CCDS DB by Nucleotide ID:NM_001143980Re-query CCDS DB by Protein ID:NP_001137452Link to BLAST:NP_001137452.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001137452.1 667 A6NI56 667 100% 0 0

Chromosomal Locations for CCDS 92082.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 1434408 1434534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1434668 1434852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1435089 1435175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1435969 1436086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1436445 1436521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1436692 1436811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1437817 1437954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1438050 1438176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1438619 1438737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1438815 1438943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1439025 1439126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1442406 1442529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1442880 1442975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1443261 1443301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1443506 1443695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1443796 1444012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1444316 1444322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2004 nt):
ATGTCAGAGTTGGCTGACAGTGGACCCTCAGGGGCATCGGCCCCTTCCCAGCTGAGAGCCGTCACCCTGG
AAGACCTGGGGCTCCTCCTGGCAGGAGGCCTGGCCAGCCCCGAGCCCTTGAGCCTGGAGGAGCTCTCGGA
GAGGTATGAGTCCAGCCATCCGACATCCACGGCCTCTGTCCCCGAGCAGGACACCGCCAAGCACTGGAAC
CAGCTGGAGCAGTGGGTGGTGGAGCTGCAGGCCGAGGTGGCCTGCCTGCGGGAGCACAAGCAGCGCTGTG
AGCGCGCCACGCGGAGCCTGCTGCGGGAGCTGCTCCAGGTGCGGGCCCGCGTGCAGCTGCAGGGCTCAGA
GCTGAGGCAGTTGCAGCAGGAGGCGCGGCCGGCAGCCCAGGCCCCCGAAAAGGAGGCGCCGGAGTTCTCT
GGTCTCCAGAACCAGATGCAGGCCCTGGACAAAAGGCTGGTGGAGGTCCGGGAAGCCTTGACCCGGCTCA
GGAGGAGGCAGGTGCAACAGGAGGCGGAGAGAAGGGGCGCCGAGCAAGAGGCCGGCCTCAGACTGGCCAA
GCTGACCGACTTGCTGCAGCAGGAGGAGCAGGGCCGGGAGGTGGCCTGCGGCGCCCTGCAGAAGAACCAA
GAGGACAGCAGCCGGAGGGTGGACCTGGAGGTGGCCAGAATGCAGGCCCAGGTGACCAAGCTCGGCGAAG
AGGTGAGCCTGCGCTTCCTGAAGAGGGAGGCCAAGCTGTGCGGCTTCCTGCAGAAGAGCTTCCTGGCCCT
GGAGAAGAGAATGAAGGCCTCGGAGAGCTCACGGCTGAAGCTGGAGGGCAGCCTGCGGGGCGAGCTGGAG
AGCCGGTGGGAGAAGCTTCGGGGGCTGATGGAGGAGCGCCTGCGGGCCCTGCAGGGGCAGCATGAGGAGA
GCCACCTCCTGGAGCAGTGCCAGGGCCTGGATGCTGCCGTGGCCCAGCTGACCAAGTTTGTGCAGCAGAA
CCAGGCGTCGCTGAACCGTGTCCTACTGGCCGAGGAGAAAGCCTGGGACGCCAAGGGGCGCTTGGAGGAA
AGCCGGGCTGGGGAGCTGGCCGCCTATGTGCAGGAGAACCTGGAGGCCGCACAGCTGGCTGGCGAGCTGG
CCCGGCAGGAGATGCATGGAGAGCTGGTGCTGCTCCGAGAGAAGAGCCGGGCTCTGGAGGCATCCGTGGC
GCAGCTGGCCGGGCAGTTAAAGGAGCTGAGTGGCCATCTCCCGGCTCTGAGCAGCCGGCTCGATCTGCAG
GAGCAGATGCTGGGCCTCAGGCTGTCCGAGGCAAAGACCGAATGGGAAGGTGCAGAGAGGAAGTCCCTGG
AGGACCTGGCCAGGTGGCGGAAGGAGGTGACCGAACACCTGCGAGGGGTGCGGGAGAAGGTGGATGGCCT
CCCCCAGCAGATAGAGAGTGTCTCCGACAAGTGCCTGCTTCATAAGAGCGACTCAGACCTCAGGATTTCC
GCCGAAGGCAAGGCCAGGGAGTTCAAGGTTGGGGCCCTGCGGCAGGAGCTGGCCACGCTACTATCATCCG
TGCAGCTGCTAAAGGAAGACAACCCTGGGCGGAAGATCGCGGAGATGCAGGGCAAGCTGGCCACGTTTCA
GAACCAAATAATGAAGCTGGAAAACTGCGTCCAGGCCAACAAGACCATCCAGAACCTCAGGTTCAACACT
GAGGCCCGGCTGCGCACGCAGGAGATGGCCACCCTGTGGGAGAGTGTGCTCCGGCTGTGGAGTGAGGAGG
GCCCGCGGACGCCGCTGGGCAGCTGGAAGGCGCTCCCATCCCTGGTGAGGCCGCGGGTCTTCATCAAGGA
CATGGCGCCTGGCAAGGTGGTGCCCATGAACTGCTGGGGCGTGTACCAGGCTGTGAGGTGGCTGCGCTGG
AAGGCGTCCCTCATAAAGCTCAGGGCCCTGCGGAGGCCAGGAGGGGTCCTGGAGAAGCCCCACAGCCAGG
AGCAGGTGCAGCAGCTCACACCCTCACTGTTTATCCAGAAATAA

Translation (667 aa):
MSELADSGPSGASAPSQLRAVTLEDLGLLLAGGLASPEPLSLEELSERYESSHPTSTASVPEQDTAKHWN
QLEQWVVELQAEVACLREHKQRCERATRSLLRELLQVRARVQLQGSELRQLQQEARPAAQAPEKEAPEFS
GLQNQMQALDKRLVEVREALTRLRRRQVQQEAERRGAEQEAGLRLAKLTDLLQQEEQGREVACGALQKNQ
EDSSRRVDLEVARMQAQVTKLGEEVSLRFLKREAKLCGFLQKSFLALEKRMKASESSRLKLEGSLRGELE
SRWEKLRGLMEERLRALQGQHEESHLLEQCQGLDAAVAQLTKFVQQNQASLNRVLLAEEKAWDAKGRLEE
SRAGELAAYVQENLEAAQLAGELARQEMHGELVLLREKSRALEASVAQLAGQLKELSGHLPALSSRLDLQ
EQMLGLRLSEAKTEWEGAERKSLEDLARWRKEVTEHLRGVREKVDGLPQQIESVSDKCLLHKSDSDLRIS
AEGKAREFKVGALRQELATLLSSVQLLKEDNPGRKIAEMQGKLATFQNQIMKLENCVQANKTIQNLRFNT
EARLRTQEMATLWESVLRLWSEEGPRTPLGSWKALPSLVRPRVFIKDMAPGKVVPMNCWGVYQAVRWLRW
KASLIKLRALRRPGGVLEKPHSQEQVQQLTPSLFIQK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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