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Report for CCDS20809.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20809.1 Public Mus musculus 7 Zfp551 23 108 98 CCDS HistoryNCBI Gene:619331Re-query CCDS DB by CCDS ID:20809.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20809.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000080348.11 ENSMUSP00000079222.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000080348.11Link to Ensembl Protein Viewer:ENSMUSP00000079222.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000080348Re-query CCDS DB by Protein ID:ENSMUSP00000079222
Original member Current member NCBI NM_001033820.3 NP_001028992.2 Accepted alive Link to Nucleotide Sequence:NM_001033820.3Link to Protein Sequence:NP_001028992.2Re-query CCDS DB by Nucleotide ID:NM_001033820Re-query CCDS DB by Protein ID:NP_001028992Link to BLAST:NP_001028992.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001028992.2 696 B2RUI1 696 100% 0 0

Chromosomal Locations for CCDS 20809.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 12415390 12417218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12418543 12418666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12421808 12421846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12422390 12422488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2091 nt):
ATGCCCCGAGCCAGGCCTAGGGAAGAGACCTCGGCGACCTGGTCCTTGCTTCCTCTACAGAATCCAATGG
CT
GTGGCCATGCACAGGAACATAGCCCAGGTTCCCCTGACTTCAGAACCAGTTATGGAGCTTGGCCTGGA
T
GTGTCCTTTGAGGATGTGGCCATTCACTTCTCCCAGGAAGAGTGGGTGCTCCTTGATAAGGCCCAGAGA
CTC
CTGTACTGCAGTGTGATGCTGGAAAACTTGGCACTTGTGGCATCTCTGGGTTCCTGTACTGGAATGG
GG
GATGAAGACGTAACTTGTGAGCCTGCAGAAGAGGTGGTGTGTAACACAAGTCCATCTCCCCAGGAGAC
T
CATCTCCTTGAGATACCTGTCCCAGCTTTGGAAGAGGCTTGGCACCAGAATGAGTTCTTGAGCACACAG
CCT
GTGCAGACATTAGATTTGAGCAGAACAGGTTCCGGTTTGAAGGAAGACAGTAACCGGCATTGGAAGA
GT
TACAGTGGTGAAAAGTCCTGTGAAAGGGATTCTCACAGGGCTACAGCTATGTCAAGTTGCAGATCCCA
T
GGGTTGACTGAGCCATTCATCCGTGGGAAGGATGGTGAGGAGGCCCTCTCCTCTATAGCTGGTGTTCAG
CAG
CAGGGTGCGTGTCATAGTGAACAGCCCTCCACAGGCTGTCTTCAACAGCAAGCCACTTGTATTCGTG
AA
CAGCCTTATAGCAGTGCCAAGTGTGGGCAAGCACTTTTGAATGGAGAGAAACATTGTAAGGACGGTGA
A
TGCCAAAAAGGTTCAAGCTGCAAACACACACTTGTTCAGTGTCCAAGTGCCTCCTCTGAGAAAAGGCCA
TCT
GAGTGTAGCAAGTATGAGAAAGCCTTCTCCTGCAGTTACAAGCATGCTCAGCATCAGGACAGTCACT
CG
GGAAAAAGGACACATGAGCATAGTCAGCATGAGAAGCCCTTCAGCAAAAAGTGCCGCCTCAACACACA
A
GACAGAATTTGTCCTCAAGAAAGGCCCTATAAATGTACTGAATGTGGAAAAGCCTTTATCTACAAATCT
GAA
CTCGTTTACCATCAGAGACATCACAGTGCTAGAGTACATTATGAGTGTGTGGAATGTAGAAAATCCT
TC
ACGTACAAATCCAACCTCACTGAACACCAGAGAATCCACACTGGAGAAAGGCCTTACCAGTGTGAACA
A
TGTGGAAAATCCTTCAGACAAAACTCTAGCCTCTTTAGACACCACCGAATTCATACTGGAGAAAGGCCA
TAC
GAGTGCTCCGAGTGTGGGAAATCCTTTAGACAGATCTTTAATCTCATCAGACACAGGCGAGTCCACA
CT
GGAGAAATGCCTCACCAGTGTGCTGATTGTGGAAAAGCCTTTAGCTGCAAAGCTGAACTCAGTCAACA
C
GAGCGAATTCACAGCGGGGAAAAGCCTTATGAGTGTAGCGAGTGTGGAAAATACTTCAGGCAGTTCTCC
AAC
CTCATTCGACACCGGAGAGTACACACAGGTGACAGGCCTTACAAGTGCAGTGAATGTGAGAAATCCT
TC
AGTCGCAAATTCATCCTCGTCCAGCACCAAAGAGTTCACACTGGAGAAAGGCCTTACAAATGTGGGGA
A
TGCGGCACATCCTTCACCCGAAAATCTGACCTCATCCAGCACCAAAGAATTCACACTGGCACGAGACCT
TAT
GAGTGTGAAGAGTGTGGGAAGTCATTCAGGCAATGCTCTAGCCTCATCCAGCACCGGAGAGTTCATA
CC
GGAGAGAAGCCTTATGAGTGTATCGAATGTGGGAAAGCCTTTAGTCAGAGTGCTAGCCTCATTCAACA
C
CAGAGACTGCACACTGGAGAAAGGCCCTATGAGTGTAGTGAATGCGGGAAGTCCTTCAGCCAGAGTGCT
AGC
CTGATTCAACACCAGAGAAGCCACAGTGGAGAAAAACCTTTTGAATGTAGTGATTGCAGCAAACCCT
TC
ACTCATAAGTCTGACCTGATTCAGCACCGAAGGGTTCATACTGGAGAAAGACCTTACGAGTGCCATGA
T
TGTGAGAAATCCTTTAGCCGTCGATCGAATCTTGTCCGACACCAGCGAGTTCACACCTAA


Translation (696 aa):
MPRARPREETSATWSLLPLQNPMAVAMHRNIAQVPLTSEPVMELGLDVSFEDVAIHFSQEEWVLLDKAQR
L
LYCSVMLENLALVASL
GSCTGMGDEDVTCEPAEEVVCNTSPSPQETHLLEIPVPALEEAWHQNEFLSTQ
P
VQTLDLSRTGSGLKEDSNRHWKSYSGEKSCERDSHRATAMSSCRSHGLTEPFIRGKDGEEALSSIAGVQ
Q
QGACHSEQPSTGCLQQQATCIREQPYSSAKCGQALLNGEKHCKDGECQKGSSCKHTLVQCPSASSEKRP
S
ECSKYEKAFSCSYKHAQHQDSHSGKRTHEHSQHEKPFSKKCRLNTQDRICPQERPYKCTECGKAFIYKS
E
LVYHQRHHSARVHYECVECRKSFTYKSNLTEHQRIHTGERPYQCEQCGKSFRQNSSLFRHHRIHTGERP
Y
ECSECGKSFRQIFNLIRHRRVHTGEMPHQCADCGKAFSCKAELSQHERIHSGEKPYECSECGKYFRQFS
N
LIRHRRVHTGDRPYKCSECEKSFSRKFILVQHQRVHTGERPYKCGECGTSFTRKSDLIQHQRIHTGTRP
Y
ECEECGKSFRQCSSLIQHRRVHTGEKPYECIECGKAFSQSASLIQHQRLHTGERPYECSECGKSFSQSA
S
LIQHQRSHSGEKPFECSDCSKPFTHKSDLIQHRRVHTGERPYECHDCEKSFSRRSNLVRHQRVHT




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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