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Report for CCDS39824.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39824.1 Public Mus musculus 7 Zfp112 23 108 98 CCDS HistoryNCBI Gene:57745Re-query CCDS DB by CCDS ID:39824.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 39824.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000005413.3 ENSMUSP00000005413.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000005413.3Link to Ensembl Protein Viewer:ENSMUSP00000005413.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000005413Re-query CCDS DB by Protein ID:ENSMUSP00000005413
Original member NCBI NM_021307.2 NP_067282.2 Updated not alive Link to Nucleotide Sequence:NM_021307.2Link to Protein Sequence:NP_067282.2Re-query CCDS DB by Nucleotide ID:NM_021307Re-query CCDS DB by Protein ID:NP_067282
Current member NCBI NM_021307.3 NP_067282.2 Accepted alive Link to Nucleotide Sequence:NM_021307.3Link to Protein Sequence:NP_067282.2Re-query CCDS DB by Nucleotide ID:NM_021307Re-query CCDS DB by Protein ID:NP_067282Link to BLAST:NP_067282.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067282.2 879 Q0VAW7-1 879 100% 0 0

Chromosomal Locations for CCDS 39824.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 24118369 24118383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24122234 24122360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24123919 24124014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24124835 24127236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2640 nt):
ATGACCAAATTGCAGGAGATGGTGACCTTCAGGGATGTGGCTGTGGTCTTCAGCGAGGAGGAGCTGGGGC
TGCTGGACGCTGCCCAGTGGAAGCTGTACCGAGAGGTGATGCTGGAGAACTTCAGGATGCTGCTCTCAGT
GGCACATCAGCCCTTCAAACCGGGTCTGATAGCCCAGCTGGAGAATGGAGAGCAGCTTTGGATGGTGGAG
GCTGAAGCCCATGCAGGTGGGCTCTCGGGAAGAAGAAATGGACATGCTGTGGAGAACGCTGAAGACGTGG
AAGTAAACTCCCTTTGTCCCGAGGACCTCTCCTTCTGTCAGACCTGGCCGTGGGGTGCATGCACATTACC
CAGTGGTCAAGAGTTCATAAAAAGATGCCAAGGGAGTAATGGTGAATCTCAGAGCCAAGAAGCTTCCCCT
CGCCTGGTGTGGGCAGGAATGCCCATGCAGATTTCTGAAGACGGGAATTACGGATTGCCTCCTGCACACG
AAGACTCTGCTTCTATGAAAAATCAAGAGTTTCCTCCTCCAAGATCCCAGCAGTCTCAGGGGGAACCATA
TCTCGGCAGGCCATGTGTGACATGCCAGTGGAAAGGTCAGCAAACATCCATAAGAAATCACTTCTGTAGG
TATGGCAGTGTCTGCTGGTCCCCCTACCACAGTGACAATGAGGAGCTATACAGCAAAGGAAAAAGCTATG
GTTTCCATGACGACAGAGGAAAGACGGTGAAGGTATTATTACTTAATCAGGACTTTATTGAATTAGGGCC
AGAGCCCTGCCCACGTACCAAGAACAGAGAAGCCTGGGGCCATGACAATGACCACAGCTCTCACACACAT
CAGCAGTGCCACTCAAGAGGGAAGCCGTGTACACGGAGTCTGTCTGGAGAGGGCTGTGGTGATAGGTCAG
CCCTCCACGGTCATCCAGGTCTTGAGGCAGGAGATGAAGGTGCTGATGGGAGCCCACCTCTGCAGTCTTC
TCCAAGAGTGTGTATGGAGCAAGTGCCACGCGAGTGCAGTGGGAATGTCCACTATGGTTCCCCTCTTAAC
ACTTGTGGGTGTGCCCACCCAGGCAACACCTCCCAGACATGCAGCATCCCCAAGCAAGCTGTTGGTAGTC
CTGTCCACTGCAATAGTACCTTTAGGGCCCATCCTAGGGAAGAGCCCAATAATTATGAGGAGAATAGGAA
TGTTTTTAATCAGAGTTCATGTCTTCAAGTTAGTCGGAAAATCGGTGCTGAAGAGAAGCTATGTCAAGGT
GTGGAGTGTAGAAAAAATTTCACACACTGCTCAAGTCTGAACATTCCACACAGAGTCCCTGTGGAGGAGA
CTCTCTGTAACCCTGATTGTGGTAACCACTTCAGTTTGCCTCCACATTTTCAGGACTTTCCAGGAGTGCG
TGCCAGGGAACAACCACACAATCGTTTGTGCCGTACAGGCTTCAGTCAAACTTTGTGCCTTCAAGGCCAT
CAGAAACTCCACATTCGAGAAAAGCCTTCTCATAGAGAGGGTGGAAGTGGCTGTAACTGGAGTTCCACCC
CCAAGGATCCTCAGAAACAGAAACTGCACAAATGCAATGCCTGTGGGAAGGGCTTCAGTCACAGATCAGT
TCTGGACATTCATCACAGAATCCACACAGGAGAGAAGCCATACAAGTGTGAGGAGTGTGGGAAGGGCTTC
AGCCGGAGTGCATACCTGCAAGGCCACCAGAGAGTTCACACAGGAGAGAAACCATACAAGTGTGAGGAGT
GTGGGAAGGGCTTCAGCCGGAGTTCACACCTGCAAGGCCACCAGAGAGTTCACACAGGAGAGAAACCATA
CAAGTGTGAGGAGTGTGGGAAGGGCTTCAGCTGGAGCTTTAACCTTCAAATCCATCAGCGGGTTCACACT
GGAGAGAAACCCTATAAATGTGGAGAGTGTGGCAAAGGCTTCAGTAAGGCCTCAACTCTCCTGGCCCACG
AGAGAGTCCACACAGGAGAGAAACCTTACCAGTGTCATGAGTGCGGCAAGAACTTTAGTCAGAAATCCTA
CCTTCAAAGCCATCAGAGTGTCCACTCTGGAGAGAGACCACATATATGTGAGGTGTGTGGGAAGGGCTTC
AGTCAGAGAGCATATCTACAAGGTCACCTGAGAGTCCACACTCGAGTAAAACCCTACAAATGTGAGGTGT
GTGGGAAGGGCTTCAGTCAGGGTTCACGCCTTGAAGCACACCAGAGGGTCCACACAGGGCGAAAACCATT
CAAATGTGAGACCTGCACAAAGGGATTCAGTGAGAGTTCCCGCCTCCAGGCACATCAGAGGATCCATGAG
GAAGGAAGACCCTACAAATGTGACCAGTGTGGTAAGGGCTTCAGTGGCTATTCCAGTCTCCAAGCCCATC
ACCGAGTCCACACTGGGGAGAAGCCATACAAATGTGAGGTGTGTGGGAAGGGCTTCAGTCAGAGATCGAA
TCTCCAAGCTCATCAGCGCGTGCACACAGGAGAGAAACCGTACACGTGTGATGCGTGTGGTAAGGGTTTC
CGTTGGAGCTCAGGCCTTCTGATCCATCAAAGGGCCCATAGCAGTGATACATTCTACAGGAGTGGAGAGT
GTGGGAGCAGTTATCCACCTGAGAACCTATGCAGAAATGAAGGCCTGTAA

Translation (879 aa):
MTKLQEMVTFRDVAVVFSEEELGLLDAAQWKLYREVMLENFRMLLSVAHQPFKPGLIAQLENGEQLWMVE
AEAHAGGLSGRRNGHAVENAEDVEVNSLCPEDLSFCQTWPWGACTLPSGQEFIKRCQGSNGESQSQEASP
RLVWAGMPMQISEDGNYGLPPAHEDSASMKNQEFPPPRSQQSQGEPYLGRPCVTCQWKGQQTSIRNHFCR
YGSVCWSPYHSDNEELYSKGKSYGFHDDRGKTVKVLLLNQDFIELGPEPCPRTKNREAWGHDNDHSSHTH
QQCHSRGKPCTRSLSGEGCGDRSALHGHPGLEAGDEGADGSPPLQSSPRVCMEQVPRECSGNVHYGSPLN
TCGCAHPGNTSQTCSIPKQAVGSPVHCNSTFRAHPREEPNNYEENRNVFNQSSCLQVSRKIGAEEKLCQG
VECRKNFTHCSSLNIPHRVPVEETLCNPDCGNHFSLPPHFQDFPGVRAREQPHNRLCRTGFSQTLCLQGH
QKLHIREKPSHREGGSGCNWSSTPKDPQKQKLHKCNACGKGFSHRSVLDIHHRIHTGEKPYKCEECGKGF
SRSAYLQGHQRVHTGEKPYKCEECGKGFSRSSHLQGHQRVHTGEKPYKCEECGKGFSWSFNLQIHQRVHT
GEKPYKCGECGKGFSKASTLLAHERVHTGEKPYQCHECGKNFSQKSYLQSHQSVHSGERPHICEVCGKGF
SQRAYLQGHLRVHTRVKPYKCEVCGKGFSQGSRLEAHQRVHTGRKPFKCETCTKGFSESSRLQAHQRIHE
EGRPYKCDQCGKGFSGYSSLQAHHRVHTGEKPYKCEVCGKGFSQRSNLQAHQRVHTGEKPYTCDACGKGF
RWSSGLLIHQRAHSSDTFYRSGECGSSYPPENLCRNEGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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