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Report for CCDS22707.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22707.1 Public Mus musculus 8 Mbtps1 23 108 98 CCDS HistoryNCBI Gene:56453Re-query CCDS DB by CCDS ID:22707.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22707.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000081381.5 ENSMUSP00000080117.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000081381.5Link to Ensembl Protein Viewer:ENSMUSP00000080117.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000081381Re-query CCDS DB by Protein ID:ENSMUSP00000080117
Original member Current member EBI ENSMUST00000098362.10 ENSMUSP00000095965.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098362.10Link to Ensembl Protein Viewer:ENSMUSP00000095965.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000098362Re-query CCDS DB by Protein ID:ENSMUSP00000095965
Original member Current member NCBI NM_001167910.1 NP_001161382.1 Accepted alive Link to Nucleotide Sequence:NM_001167910.1Link to Protein Sequence:NP_001161382.1Re-query CCDS DB by Nucleotide ID:NM_001167910Re-query CCDS DB by Protein ID:NP_001161382Link to BLAST:NP_001161382.1
Original member Current member NCBI NM_019709.4 NP_062683.3 Accepted alive Link to Nucleotide Sequence:NM_019709.4Link to Protein Sequence:NP_062683.3Re-query CCDS DB by Nucleotide ID:NM_019709Re-query CCDS DB by Protein ID:NP_062683Link to BLAST:NP_062683.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001161382.1 1052 Q9WTZ2 1052 100% 0 0
NP_062683.3 1052 Q9WTZ2 1052 100% 0 0

Chromosomal Locations for CCDS 22707.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 119508779 119508975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119510254 119510384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119513874 119514000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119515578 119515709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119518139 119518279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119520272 119520349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119520998 119521122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119521755 119521911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119522479 119522594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119524427 119524599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119525368 119525556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119528924 119529068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119531049 119531210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119533321 119533472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119535275 119535377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119538127 119538194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119538844 119538960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119541585 119541694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119542075 119542185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119542725 119542928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119545984 119546241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119547400 119547562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3159 nt):
ATGAAGCTCGTCAGCACCTGGCTTCTTGTGCTGGTGGTTTTGCTCTGTGGGAAACGGCACCTGGGCGACA
GGCTGGGGACGAGAGCTTTGGAAAAGGCCCCGTGCCCCAGCTGCTCCCACCTGACTTTGAAGGTGGAATT
CTCTTCAACTGTGGTGGAGTACGAATATATTGTGGCTTTCAACGGATACTTCACAGCCAAAGCTAGAAAC
TCATTTATTTCAAGTGCTCTGAAAAGCAGTGAAGTGGAAAACTGGAGAATAATACCTCGGAACAACCCAT
CCAGTGACTACCCTAGTGATTTTGAGGTGATTCAGATAAAAGAGAAGCAGAAGGCGGGGCTGCTCACACT
TGAAGATCACCCCAACATCAAGCGGGTGACACCCCAGCGGAAAGTCTTTCGTTCCCTCAAGTTTGCTGAA
TCCAACCCCATCGTGCCCTGTAATGAAACCCGGTGGAGCCAGAAGTGGCAGTCATCACGTCCCCTGAAAA
GAGCCAGTCTCTCCCTGGGCTCTGGATTCTGGCATGCAACAGGAAGACATTCAAGTCGGCGATTGCTGAG
AGCCATTCCTCGCCAGGTCGCCCAGACACTGCAGGCAGATGTGCTGTGGCAGATGGGATACACAGGTGCT
AATGTCAGAGTTGCTGTTTTTGATACTGGGCTCAGTGAGAAGCATCCGCATTTTAAGAATGTGAAGGAGA
GAACCAACTGGACCAATGAGCGGACCCTGGATGATGGGCTAGGCCATGGCACATTCGTTGCAGGTGTGAT
TGCCAGCATGAGGGAGTGCCAAGGATTTGCTCCAGATGCAGAGCTGCACATCTTCAGGGTCTTTACCAAC
AATCAGGTGTCTTACACATCTTGGTTTCTGGATGCCTTCAACTATGCCATCCTAAAGAAGATGGACGTTC
TCAACCTTAGCATCGGTGGGCCCGACTTCATGGATCATCCGTTTGTTGACAAGGTGTGGGAATTAACAGC
TAACAATGTAATTATGGTTTCTGCTATTGGCAATGATGGACCTCTCTATGGCACTCTGAATAACCCTGCT
GATCAGATGGATGTGATTGGAGTGGGTGGCATTGACTTTGAAGATAACATCGCTCGCTTTTCTTCCAGGG
GAATGACTACCTGGGAATTACCAGGAGGCTATGGTCGTGTGAAGCCTGACATTGTCACCTATGGTGCTGG
AGTGCGGGGTTCCGGTGTGAAAGGGGGCTGCCGTGCACTCTCAGGGACCAGTGTCGCTTCCCCAGTGGTC
GCTGGGGCCGTCACCTTGTTAGTAAGCACAGTACAGAAGCGGGAGCTGGTGAATCCTGCCAGTGTGAAGC
AAGCTTTGATAGCGTCAGCCCGGAGACTTCCTGGGGTCAACATGTTCGAGCAAGGTCATGGCAAGTTGGA
TCTGCTGCGAGCTTATCAGATCCTCAGCAGCTATAAACCGCAGGCAAGCCTGAGTCCTAGCTACATCGAC
CTGACTGAGTGTCCCTACATGTGGCCCTACTGCTCCCAGCCTATCTACTATGGAGGAATGCCAACAATCG
TTAATGTCACCATCCTCAATGGCATGGGCGTCACAGGAAGAATTGTGGATAAGCCTGAGTGGCGACCCTA
TTTACCACAGAATGGAGACAACATTGAAGTGGCCTTCTCCTACTCCTCAGTGTTGTGGCCCTGGTCAGGT
TACCTTGCCATCTCCATTTCTGTGACCAAGAAGGCAGCTTCCTGGGAAGGCATCGCTCAGGGCCACATCA
TGATCACAGTGGCGTCCCCAGCAGAGACAGAGTTACACAGTGGTGCGGAGCACACTTCCACCGTGAAGCT
GCCCATCAAGGTGAAGATCATTCCCACCCCTCCTCGGAGCAAGAGAGTCCTCTGGGACCAGTACCACAAC
CTCCGCTACCCACCTGGCTACTTCCCCAGGGACAACTTGCGGATGAAGAATGACCCTTTAGACTGGAATG
GCGACCACGTCCACACCAACTTCAGGGACATGTACCAGCATCTGCGCAGCATGGGCTACTTCGTGGAGGT
GCTCGGCGCCCCATTCACATGTTTTGACGCCACACAGTATGGCACTTTGCTGCTGGTGGACAGTGAGGAA
GAGTACTTCCCTGAGGAGATTGCTAAGCTGAGGAGGGATGTGGACAATGGCCTTTCCCTCGTCATCTTCA
GTGACTGGTACAACACTTCTGTTATGAGAAAAGTGAAGTTTTATGATGAAAACACCAGGCAGTGGTGGAT
GCCAGACACCGGAGGAGCGAACATCCCAGCTCTGAATGAGCTGCTGTCTGTGTGGAACATGGGGTTCAGT
GACGGCCTATATGAAGGGGAGTTTGTCCTGGCAAACCATGACATGTACTATGCGTCGGGGTGCAGCATCG
CCAAGTTTCCAGAAGATGGCGTCGTGATCACACAGACTTTCAAGGACCAAGGATTGGAGGTCTTAAAACA
AGAGACAGCAGTTGTGGAAAATGTTCCCATTTTGGGGCTTTATCAGATTCCATCTGAAGGTGGAGGCCGG
ATCGTGCTGTATGGAGACTCCAACTGCTTGGATGACAGTCACAGACAGAAGGACTGCTTTTGGCTTCTGG
ATGCGCTCCTTCAGTACACATCCTATGGCGTGACCCCTCCCAGCCTCAGCCATTCAGGGAACCGGCAGCG
CCCACCTAGCGGAGCCGGCTTGGCCCCTCCTGAAAGGATGGAAGGAAACCACCTCCATCGGTACTCCAAA
GTTCTTGAAGCCCACTTGGGAGACCCGAAACCTCGGCCCCTGCCAGCCTGTCCACATTTGTCATGGGCCA
AGCCACAGCCTTTGAATGAGACGGCACCCAGTAATCTTTGGAAACATCAGAAGCTGCTCTCCATTGACCT
GGACAAAGTAGTGTTACCCAACTTTCGATCCAATCGCCCTCAAGTGAGACCTTTGTCCCCTGGAGAGAGT
GGTGCCTGGGACATTCCTGGAGGGATCATGCCTGGCCGCTACAACCAGGAGGTGGGACAGACCATCCCCG
TCTTCGCCTTCCTCGGAGCCATGGTGGCCCTGGCCTTCTTTGTGGTACAGATCAGCAAGGCCAAGAGCCG
GCCGAAGCGGAGGAGGCCCAGGGCAAAGCGTCCACAACTTGCACAGCAGGCCCACCCTGCAAGGACCCCA
TCAGTGTGA

Translation (1052 aa):
MKLVSTWLLVLVVLLCGKRHLGDRLGTRALEKAPCPSCSHLTLKVEFSSTVVEYEYIVAFNGYFTAKARN
SFISSALKSSEVENWRIIPRNNPSSDYPSDFEVIQIKEKQKAGLLTLEDHPNIKRVTPQRKVFRSLKFAE
SNPIVPCNETRWSQKWQSSRPLKRASLSLGSGFWHATGRHSSRRLLRAIPRQVAQTLQADVLWQMGYTGA
NVRVAVFDTGLSEKHPHFKNVKERTNWTNERTLDDGLGHGTFVAGVIASMRECQGFAPDAELHIFRVFTN
NQVSYTSWFLDAFNYAILKKMDVLNLSIGGPDFMDHPFVDKVWELTANNVIMVSAIGNDGPLYGTLNNPA
DQMDVIGVGGIDFEDNIARFSSRGMTTWELPGGYGRVKPDIVTYGAGVRGSGVKGGCRALSGTSVASPVV
AGAVTLLVSTVQKRELVNPASVKQALIASARRLPGVNMFEQGHGKLDLLRAYQILSSYKPQASLSPSYID
LTECPYMWPYCSQPIYYGGMPTIVNVTILNGMGVTGRIVDKPEWRPYLPQNGDNIEVAFSYSSVLWPWSG
YLAISISVTKKAASWEGIAQGHIMITVASPAETELHSGAEHTSTVKLPIKVKIIPTPPRSKRVLWDQYHN
LRYPPGYFPRDNLRMKNDPLDWNGDHVHTNFRDMYQHLRSMGYFVEVLGAPFTCFDATQYGTLLLVDSEE
EYFPEEIAKLRRDVDNGLSLVIFSDWYNTSVMRKVKFYDENTRQWWMPDTGGANIPALNELLSVWNMGFS
DGLYEGEFVLANHDMYYASGCSIAKFPEDGVVITQTFKDQGLEVLKQETAVVENVPILGLYQIPSEGGGR
IVLYGDSNCLDDSHRQKDCFWLLDALLQYTSYGVTPPSLSHSGNRQRPPSGAGLAPPERMEGNHLHRYSK
VLEAHLGDPKPRPLPACPHLSWAKPQPLNETAPSNLWKHQKLLSIDLDKVVLPNFRSNRPQVRPLSPGES
GAWDIPGGIMPGRYNQEVGQTIPVFAFLGAMVALAFFVVQISKAKSRPKRRRPRAKRPQLAQQAHPARTP
SV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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