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Report for CCDS10792.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10792.1 Public Homo sapiens 16 MMP15 24 110 108 CCDS HistoryNCBI Gene:4324Re-query CCDS DB by CCDS ID:10792.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10792.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000219271.4 ENSP00000219271.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000219271.4Link to Ensembl Protein Viewer:ENSP00000219271.3Re-query CCDS DB by Nucleotide ID:ENST00000219271Re-query CCDS DB by Protein ID:ENSP00000219271
Original member Current member NCBI NM_002428.4 NP_002419.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002428.4Link to Protein Sequence:NP_002419.1Re-query CCDS DB by Nucleotide ID:NM_002428Re-query CCDS DB by Protein ID:NP_002419Link to BLAST:NP_002419.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002419.1 669 P51511 669 100% 0 0

Chromosomal Locations for CCDS 10792.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 58026351 58026512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58037472 58037620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58038266 58038394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58039875 58040182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58040537 58040698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58041617 58041870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58042231 58042369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58043210 58043360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58043512 58043627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 58045007 58045446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2010 nt):
ATGGGCAGCGACCCGAGCGCGCCCGGACGGCCGGGCTGGACGGGCAGCCTCCTCGGCGACCGGGAGGAGG
CGGCGCGGCCGCGACTGCTGCCGCTGCTCCTGGTGCTTCTGGGCTGCCTGGGCCTTGGCGTAGCGGCCGA
AGACGCGGAGGTCCATGCCGAGAACTGGCTGCGGCTTTATGGCTACCTGCCTCAGCCCAGCCGCCATATG
TCCACCATGCGTTCCGCCCAGATCTTGGCCTCGGCCCTTGCAGAGATGCAGCGCTTCTACGGGATCCCAG
TCACCGGTGTGCTCGACGAAGAGACCAAGGAGTGGATGAAGCGGCCCCGCTGTGGGGTGCCAGACCAGTT
CGGGGTACGAGTGAAAGCCAACCTGCGGCGGCGTCGGAAGCGCTACGCCCTCACCGGGAGGAAGTGGAAC
AACCACCATCTGACCTTTAGCATCCAGAACTACACGGAGAAGTTGGGCTGGTACCACTCGATGGAGGCGG
TGCGCAGGGCCTTCCGCGTGTGGGAGCAGGCCACGCCCCTGGTCTTCCAGGAGGTGCCCTATGAGGACAT
CCGGCTGCGGCGACAGAAGGAGGCCGACATCATGGTACTCTTTGCCTCTGGCTTCCACGGCGACAGCTCG
CCGTTTGATGGCACCGGTGGCTTTCTGGCCCACGCCTATTTCCCTGGCCCCGGCCTAGGCGGGGACACCC
ATTTTGACGCAGATGAGCCCTGGACCTTCTCCAGCACTGACCTGCATGGAAACAACCTCTTCCTGGTGGC
AGTGCATGAGCTGGGCCACGCGCTGGGGCTGGAGCACTCCAGCAACCCCAATGCCATCATGGCGCCGTTC
TACCAGTGGAAGGACGTTGACAACTTCAAGCTGCCCGAGGACGATCTCCGTGGCATCCAGCAGCTCTACG
GTACCCCAGACGGTCAGCCACAGCCTACCCAGCCTCTCCCCACTGTGACGCCACGGCGGCCAGGCCGGCC
TGACCACCGGCCGCCCCGGCCTCCCCAGCCACCACCCCCAGGTGGGAAGCCAGAGCGGCCCCCAAAGCCG
GGCCCCCCAGTCCAGCCCCGAGCCACAGAGCGGCCCGACCAGTATGGCCCCAACATCTGCGACGGGGACT
TTGACACAGTGGCCATGCTTCGCGGGGAGATGTTCGTGTTCAAGGGCCGCTGGTTCTGGCGAGTCCGGCA
CAACCGCGTCCTGGACAACTATCCCATGCCCATCGGGCACTTCTGGCGTGGTCTGCCCGGTGACATCAGT
GCTGCCTACGAGCGCCAAGACGGTCGTTTTGTCTTTTTCAAAGGTGACCGCTACTGGCTCTTTCGAGAAG
CGAACCTGGAGCCCGGCTACCCACAGCCGCTGACCAGCTATGGCCTGGGCATCCCCTATGACCGCATTGA
CACGGCCATCTGGTGGGAGCCCACAGGCCACACCTTCTTCTTCCAAGAGGACAGGTACTGGCGCTTCAAC
GAGGAGACACAGCGTGGAGACCCTGGGTACCCCAAGCCCATCAGTGTCTGGCAGGGGATCCCTGCCTCCC
CTAAAGGGGCCTTCCTGAGCAATGACGCAGCCTACACCTACTTCTACAAGGGCACCAAATACTGGAAATT
CGACAATGAGCGCCTGCGGATGGAGCCCGGCTACCCCAAGTCCATCCTGCGGGACTTCATGGGCTGCCAG
GAGCACGTGGAGCCAGGCCCCCGATGGCCCGACGTGGCCCGGCCGCCCTTCAACCCCCACGGGGGTGCAG
AGCCCGGGGCGGACAGCGCAGAGGGCGACGTGGGGGATGGGGATGGGGACTTTGGGGCCGGGGTCAACAA
GGACGGGGGCAGCCGCGTGGTGGTGCAGATGGAGGAGGTGGCACGGACGGTGAACGTGGTGATGGTGCTG
GTGCCACTGCTGCTGCTGCTCTGCGTCCTGGGCCTCACCTACGCGCTGGTGCAGATGCAGCGCAAGGGTG
CGCCACGTGTCCTGCTTTACTGCAAGCGCTCGCTGCAGGAGTGGGTCTGA

Translation (669 aa):
MGSDPSAPGRPGWTGSLLGDREEAARPRLLPLLLVLLGCLGLGVAAEDAEVHAENWLRLYGYLPQPSRHM
STMRSAQILASALAEMQRFYGIPVTGVLDEETKEWMKRPRCGVPDQFGVRVKANLRRRRKRYALTGRKWN
NHHLTFSIQNYTEKLGWYHSMEAVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSS
PFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFSSTDLHGNNLFLVAVHELGHALGLEHSSNPNAIMAPF
YQWKDVDNFKLPEDDLRGIQQLYGTPDGQPQPTQPLPTVTPRRPGRPDHRPPRPPQPPPPGGKPERPPKP
GPPVQPRATERPDQYGPNICDGDFDTVAMLRGEMFVFKGRWFWRVRHNRVLDNYPMPIGHFWRGLPGDIS
AAYERQDGRFVFFKGDRYWLFREANLEPGYPQPLTSYGLGIPYDRIDTAIWWEPTGHTFFFQEDRYWRFN
EETQRGDPGYPKPISVWQGIPASPKGAFLSNDAAYTYFYKGTKYWKFDNERLRMEPGYPKSILRDFMGCQ
EHVEPGPRWPDVARPPFNPHGGAEPGADSAEGDVGDGDGDFGAGVNKDGGSRVVVQMEEVARTVNVVMVL
VPLLLLLCVLGLTYALVQMQRKGAPRVLLYCKRSLQEWV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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