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Report for CCDS49432.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49432.1 Public Mus musculus 14 Tasor 23 108 98 CCDS HistoryNCBI Gene:218850Re-query CCDS DB by CCDS ID:49432.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49432.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022450.5 ENSMUSP00000022450.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022450.5Link to Ensembl Protein Viewer:ENSMUSP00000022450.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000022450Re-query CCDS DB by Protein ID:ENSMUSP00000022450
Original member NCBI NM_028945.2 NP_083221.1 Updated not alive Link to Nucleotide Sequence:NM_028945.2Link to Protein Sequence:NP_083221.1Re-query CCDS DB by Nucleotide ID:NM_028945Re-query CCDS DB by Protein ID:NP_083221
Current member NCBI NM_028945.3 NP_083221.1 Accepted alive Link to Nucleotide Sequence:NM_028945.3Link to Protein Sequence:NP_083221.1Re-query CCDS DB by Nucleotide ID:NM_028945Re-query CCDS DB by Protein ID:NP_083221Link to BLAST:NP_083221.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083221.1 1498 Q69ZR9-2 1498 100% 0 0

Chromosomal Locations for CCDS 49432.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 27429069 27429384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 27438599 27438744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 27440151 27440243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 27441430 27441502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 27441887 27441978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 27442459 27442620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 27446385 27446509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 27447491 27447522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 27448155 27448260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 27449757 27449860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 27449946 27450049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 27459779 27459851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 27459941 27460012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 27461084 27461785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 27464046 27464413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 27466167 27466311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 27467506 27467565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 27471618 27472546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 27475695 27475817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 27476538 27476697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 27477112 27477220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 27479629 27479807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 27479924 27480091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 27480642 27480697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4497 nt):
ATGGCGACTGCCGCGGAGACGGAGGCCCCTTCGACGGACGCGAGCTGGAAAAGCCGCGGCGGCGGCGGCG
GAGACGACGGGATGAAGCCAGCGCTTCCGGAGCTTGAGTCCTCCCTACAAAATGGCGGCGGCGACGGCGG
CGGCGGCGCGGGGCCTGAGGAGACCGCGGCAGCTGAAGCCGCCCGGAGCTACGGCCACGAGCAGCCTCAG
CAAACCTCCGAAGCGGCCGCGGCCGCTCTGCCCAAAGGCGCCGAAGAGCCGGAAAGGCCTTTTAGGCGGA
GTTTTCAGATCCCCAGGAAGAGCAGAGAAAAGAAAGCTCTTTTCCAGCCATTAACTCCAGGGTCTCGAGA
ATTTGAAGATGTTTTAAATATTCTCCATTCATCTTACCTTGAACCATCATCAGTAACATATTTTAACTAT
AGACGAGCTTGCTTGATACATAATGAACTTTTGGAAAAAGAGTTTACAGAAAAGAGAAGAGAATTGAAGT
TTGATGGTCGTTTAGATAAGGAACTTTCAGAATCTTATGCATTTCTCATGGTTGATCGGTACCAGGTTCA
GAGCATATGTGAAAAAGGATTGCAGGTGGGCCAATCCAAAATAACAGTTCTTGGCAGTCCTTCCATGGGT
ATCTATCTTTGTAGGTATGCAGATCTCTTACAGGCTAATCCTTTGGAGGCTGGGGCAGTAGGCGATGTTG
TTATTTTTAAAATCATGAAGGGTAAAATAAAGAGTATTTATGACCCTCTCAGTGTAAAAAGCTTGGAATC
CATGTTAAGTAAAAATGCTTTGGACCCTACCCCAAAACATGAATGTCATGTGTCTAAAAATGCCAGTAGA
ATTACATCCCTCTTGGCATATAGAGCCTATGAGCTTACTCAGTATTATTTTTATGAGTATGGCTTTGATG
AAGTAAGACGAAGACCAAGACATGTTTGTCCGTATGCAGTTGTGTCTTTTACTTACAAAGATGATGTACA
AACTCCAAAGTTTTTGTCTCCATTGAGATCTAACAGCTTTAATGCAGATAGAAACATAGATAAGTTTAAC
TATACCTTGTGGAAAGGACAACTTTTAAATAAAGGAAAGCTTCTCTGTTATATTTCTTTGAGGTCCGCCA
ATCGTGCCTTTCTACCTGTCAAGCTTCCTGAGAAATTGGATGTTGAAACAGTTATGAGTATTGATTGTTT
GAAACAGAAAATTCCTCCTTCATTCTTTTATAAAGACACATATGTGGGTCCCAATGAAGTTTTAAAGAAT
GGAATGTATTGTAGCCTTTATGAAGTTGTAGAAAAGACAAGAATTGGAAGTAATATGGAATGTTTACTGC
AAAAACTGGAGAAAGAAAAACTTGTTCTTGTTAAACCTTTAGGAGACCGAGGATACCTTTTTCTTCTTTC
TCCTTTCCAGATGGTTTCTCCATATGAACATCAGACTGTCAAGTCACGAATCCTACATGCTTTATTTCTG
TTTCAAGAACCTAGATGCCTAATTATCACACAAAAAGGTATAATGAATACAACACCACTGGAGAAGCCTG
AGAACTTAGCAGATATATTAAAAATAACTCAGTTTTTACAGTTTTCTCTGATTCAATGTAGAAAAGAATT
CAAAACTATAAACACTATAAATTTTCATTCTGTTGTTGAAAAGTATGTAAGTGAATTTTTTAAGCGAGGT
TTTGGTTCGGGTAAGCGAGAGTTTTTTATGTTTTCATATGATTCACGATTAGATGATAGAAAATTCCTAT
ACTCAGCACCAAGAAATAAATCCCATATTGATGACTGCTTACATACCTACATTTACCAGCCAGAAATGTA
TCAGTTGTCTATTTTTAAATTAAAAGAGTTATTTGAGGAAAATTGGAGACGCCAGCAGTTTAGTCCACTG
TCAGATTATGAAGGTCAAGAAGAAGAACTGAATGGTTCAAAAATGAAATTTGGAAAACGGAATAATTCAA
GGGATGAAACTACTGAACCTGAACAGCAGAAGTCGTCTCATTCTTTGGATTATGATAAAGATAGAGTCAA
AGAGTTGATTAATTTAATTCAGTGTACAAAAAAAAATGTGGGTGGAGATCCAGATCCAGAAGATACAAAA
AGCAAAAATGTCTTGAAGAGGAAGCTTGAAGATCTACCTGAAAATATGAGAAAGTTTGCCAAAACAAGTA
ATTCAACTGAAAGTTGCCATCTATATGAAGAATCTCCACAGTCCATTGGCTTACTTGGACAGGATCCTAA
CTTGAGAGTGCAGCAGGAAGATTCCGGGAACACTGGGGACATCCACAAGCTTTATAATTGGCTATCGGAA
GCACTAGCAAATGCACGACACTCAGACGGATTCCTGACCGAGACAGTCAACAAGGCTTTAGGATTGAGTA
GTAGTGGTGCCTATGAAGAGCTGAAGCAAAAATGTGATTATGAGTTGAACTCTACTTTAGATAAAAAAGA
ATCTGAGCAGCCTGCTTGTACAAAAATTGAAAATGTGCATTTTAAGGATGCTCAGAGCCCATTGCTAGAA
GTGGATGCAGCATCTGTAAAGTATCCTCCTCTTCTGTCTAGCAGTGAGGATCCGAATTTAATTAATGTCA
ATAATTTTGAAGGGTGCAGTCTCTGTCCCACGGTTTCTATTGAGCATGGATTCCTTAGACAACATTCTAA
GTCAAATGATGATGAAGAGACAGAAATACATTGGAAATTGATTCCAATTACAGGAGGGAATGCAGGAAGC
CCAGAAGACCAGCATGGGAAACATGGTGAGAAACAAACACCAGGAATGAAATCACCAGGAGAACAGCTGG
TGTGCCTGCCACCAGTGGAGGCCTTTCCTAATGATCCCCGGGTCATCAATAGAGAAAGAAGCTGTGATTA
CCAGTTCCCATCCTCTCCGTCTACAGACACTCTAAAAGGCACTACCGAGGAGGACACTGTAACAGCAGGT
CAGGCGATGGCAGTGGAAGAGCAGTGTGTGCCAGCAGCAGAGCTTCCTAGAGTGAGCGAGATTACAGAAA
ATACAGTGTTAGGAGAGTTCCATCTTTTCTCTAGGAAGGTAGAAGAGATTTTGAAGGAGAAGAATGTTTC
ATATGTTAGTGCAATTTCCACACCTATCTTTTCAGCACAAGAGAAGATGAATCGCCTTTCTGAGTTCATA
CATTCTAATACTTCTAAAGCTGGTGTTGAGGAATTTGTAGATGGTTTGCATGAAAAACTAAATACTGTTG
TTATTACAGCATCAGCTAAGGGTGTGAGTTTGCCGCCAGCAGTTAGCGCTAATCATTCCCATGCTGCAGC
AGCATTGGCTTCTCTGGGAAGGCGTGTTGTGTCAATTTCCTCAAGTGACTTCAGTGCTAAAGAACTTTTT
GAGCCGCTCTGTTCTGAACATTTAAAAGATAACAACTCTAATGAACAGTATTCCTCTTCAGTGGAAGTAG
AAATGAATCGGCCACACCATTGCAAAGAGTTAATGTTGACTTCTGATCACACTGTACCTGGTGATACAGT
CCTGGAACCCACAGAAAAAGAAATAACAAAATCACCCAGTGATATAACCATTTCTGCACAACCAGCACTT
TCAAATTTTATAAGCCAGTTAGAACCTGAAGTATTTAATAGTTTGGTTAAAATCATGAAAGACGTCCAGA
AAAATACTGTGAAGTTTTACATTCACGAAGAAGAGGAGAGTGTGCTTTGCAAAGAAATAAAGGAGTATCT
TACCAAATTAGGAAATACAGAGTGTCATCCGGATCAGTTTTTGGAGAGAAGATCAAACTTGGATAAACTA
TTGATTATTATTCAAAATGAAGACATTGCAGGTTTCATTCACAAGGTGCCTGGCTTAGTGACTTTAAAGA
AGCTCCCATGTGTTAGTTTTGCTGGTGTTGATAGCCTGGATGATGTTAAAAATCATACATACAACGAGTT
ATTTGTATCTGGTGGCTTTATTGTGTCTGATGAATCAATTCTAAATCTAGAGGTTGTCACAATTGAGAGC
CTTAAAATTTTTTTGACATTCCTTGAAGAACTTAGTACTCCAGAAGGGAAATGGCAATGGAAAATCCACT
GTAAATTCCAGAAGAAACTAAAGGAACTGGGCAGAATGAACACGAAAGCTCTGAGTCTGCTGACTCTTCT
GAATGTGTATCAGAAGAAACATCTGGTTGAGATTTTGTCTTATCACAGTTGTGATTCACAAACTCGAAAT
GCTCCAGAAATGGACTGCCTTATTAGGCTTCAGGCTCAGAACATACAGCAGCGACACATAGTCTTTCTAA
CAGAGAAGAATATCAAGATGGTTTCCAGTTATACAGACAATGGAATTGTCGTTGCAACTACTGAAGACTT
TATGCAAAACTTTACAAGTCTTGTGGGCTATCACAACTCAGTTACAGAAGAAAGTCTTCCGCCGCTGCTT
GGTGCTAATGAGAACCTTGAGTCCCAGTCAGATGCTGTTTTGACATTAACCCCTTTGGAGCTGGGAGTTG
GGATTTCCCAACATTAA

Translation (1498 aa):
MATAAETEAPSTDASWKSRGGGGGDDGMKPALPELESSLQNGGGDGGGGAGPEETAAAEAARSYGHEQPQ
QTSEAAAAALPKGAEEPERPFRRSFQIPRKSREKKALFQPLTPGSREFEDVLNILHSSYLEPSSVTYFNY
RRACLIHNELLEKEFTEKRRELKFDGRLDKELSESYAFLMVDRYQVQSICEKGLQVGQSKITVLGSPSMG
IYLCRYADLLQANPLEAGAVGDVVIFKIMKGKIKSIYDPLSVKSLESMLSKNALDPTPKHECHVSKNASR
ITSLLAYRAYELTQYYFYEYGFDEVRRRPRHVCPYAVVSFTYKDDVQTPKFLSPLRSNSFNADRNIDKFN
YTLWKGQLLNKGKLLCYISLRSANRAFLPVKLPEKLDVETVMSIDCLKQKIPPSFFYKDTYVGPNEVLKN
GMYCSLYEVVEKTRIGSNMECLLQKLEKEKLVLVKPLGDRGYLFLLSPFQMVSPYEHQTVKSRILHALFL
FQEPRCLIITQKGIMNTTPLEKPENLADILKITQFLQFSLIQCRKEFKTINTINFHSVVEKYVSEFFKRG
FGSGKREFFMFSYDSRLDDRKFLYSAPRNKSHIDDCLHTYIYQPEMYQLSIFKLKELFEENWRRQQFSPL
SDYEGQEEELNGSKMKFGKRNNSRDETTEPEQQKSSHSLDYDKDRVKELINLIQCTKKNVGGDPDPEDTK
SKNVLKRKLEDLPENMRKFAKTSNSTESCHLYEESPQSIGLLGQDPNLRVQQEDSGNTGDIHKLYNWLSE
ALANARHSDGFLTETVNKALGLSSSGAYEELKQKCDYELNSTLDKKESEQPACTKIENVHFKDAQSPLLE
VDAASVKYPPLLSSSEDPNLINVNNFEGCSLCPTVSIEHGFLRQHSKSNDDEETEIHWKLIPITGGNAGS
PEDQHGKHGEKQTPGMKSPGEQLVCLPPVEAFPNDPRVINRERSCDYQFPSSPSTDTLKGTTEEDTVTAG
QAMAVEEQCVPAAELPRVSEITENTVLGEFHLFSRKVEEILKEKNVSYVSAISTPIFSAQEKMNRLSEFI
HSNTSKAGVEEFVDGLHEKLNTVVITASAKGVSLPPAVSANHSHAAAALASLGRRVVSISSSDFSAKELF
EPLCSEHLKDNNSNEQYSSSVEVEMNRPHHCKELMLTSDHTVPGDTVLEPTEKEITKSPSDITISAQPAL
SNFISQLEPEVFNSLVKIMKDVQKNTVKFYIHEEEESVLCKEIKEYLTKLGNTECHPDQFLERRSNLDKL
LIIIQNEDIAGFIHKVPGLVTLKKLPCVSFAGVDSLDDVKNHTYNELFVSGGFIVSDESILNLEVVTIES
LKIFLTFLEELSTPEGKWQWKIHCKFQKKLKELGRMNTKALSLLTLLNVYQKKHLVEILSYHSCDSQTRN
APEMDCLIRLQAQNIQQRHIVFLTEKNIKMVSSYTDNGIVVATTEDFMQNFTSLVGYHNSVTEESLPPLL
GANENLESQSDAVLTLTPLELGVGISQH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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