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Report for CCDS2367.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2367.1 Public Homo sapiens 2 EEF1B2 24 110 108 CCDS HistoryNCBI Gene:1933Re-query CCDS DB by CCDS ID:2367.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2367.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000236957.9 ENSP00000236957.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000236957.9Link to Ensembl Protein Viewer:ENSP00000236957.5Re-query CCDS DB by Nucleotide ID:ENST00000236957Re-query CCDS DB by Protein ID:ENSP00000236957
Original member Current member EBI ENST00000392221.5 ENSP00000376055.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392221.5Link to Ensembl Protein Viewer:ENSP00000376055.1Re-query CCDS DB by Nucleotide ID:ENST00000392221Re-query CCDS DB by Protein ID:ENSP00000376055
Original member Current member EBI ENST00000392222.7 ENSP00000376056.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000392222.7Link to Ensembl Protein Viewer:ENSP00000376056.2Re-query CCDS DB by Nucleotide ID:ENST00000392222Re-query CCDS DB by Protein ID:ENSP00000376056
Original member Current member NCBI NM_001037663.2 NP_001032752.1 Accepted alive Link to Nucleotide Sequence:NM_001037663.2Link to Protein Sequence:NP_001032752.1Re-query CCDS DB by Nucleotide ID:NM_001037663Re-query CCDS DB by Protein ID:NP_001032752Link to BLAST:NP_001032752.1
Original member Current member NCBI NM_001959.4 NP_001950.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001959.4Link to Protein Sequence:NP_001950.1Re-query CCDS DB by Nucleotide ID:NM_001959Re-query CCDS DB by Protein ID:NP_001950Link to BLAST:NP_001950.1
Original member Current member NCBI NM_021121.4 NP_066944.1 Accepted alive Link to Nucleotide Sequence:NM_021121.4Link to Protein Sequence:NP_066944.1Re-query CCDS DB by Nucleotide ID:NM_021121Re-query CCDS DB by Protein ID:NP_066944Link to BLAST:NP_066944.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001032752.1 225 P24534 225 100% 0 0
NP_001950.1 225 P24534 225 100% 0 0
NP_066944.1 225 P24534 225 100% 0 0

Chromosomal Locations for CCDS 2367.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 206159980 206160059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206160588 206160710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206161346 206161472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206162038 206162104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206162489 206162614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206162729 206162883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (678 nt):
ATGGGTTTCGGAGACCTGAAAAGCCCTGCCGGCCTCCAGGTGCTCAACGATTACCTGGCGGACAAGAGCT
ACATCGAGGGGTATGTGCCATCACAAGCAGATGTGGCAGTATTTGAAGCCGTGTCCAGCCCACCGCCTGC
CGACTTGTGTCATGCCCTACGTTGGTATAATCACATCAAGTCTTACGAAAAGGAAAAGGCCAGCCTGCCA
GGAGTGAAGAAAGCTTTGGGCAAATATGGTCCTGCCGATGTGGAAGACACTACAGGAAGTGGAGCTACAG
ATAGTAAAGATGATGATGACATTGACCTCTTTGGATCTGATGATGAGGAGGAAAGTGAAGAAGCAAAGAG
GCTAAGGGAAGAACGTCTTGCACAATATGAATCAAAGAAAGCCAAAAAACCTGCACTTGTTGCCAAGTCT
TCCATCTTACTAGATGTGAAACCTTGGGATGATGAGACAGATATGGCGAAATTAGAGGAGTGCGTCAGAA
GCATTCAAGCAGACGGCTTAGTCTGGGGCTCATCTAAACTAGTTCCAGTGGGATACGGAATTAAGAAACT
TCAAATACAGTGTGTAGTTGAAGATGATAAAGTTGGAACAGATATGCTGGAGGAGCAGATCACTGCTTTT
GAGGACTATGTGCAGTCCATGGATGTGGCTGCTTTCAACAAGATCTAA

Translation (225 aa):
MGFGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSSPPPADLCHALRWYNHIKSYEKEKASLP
GVKKALGKYGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKRLREERLAQYESKKAKKPALVAKS
SILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAF
EDYVQSMDVAAFNKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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