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Report for CCDS10982.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10982.1 Public Homo sapiens 16 DPEP1 24 110 108 CCDS HistoryNCBI Gene:1800Re-query CCDS DB by CCDS ID:10982.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10982.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261615.5 ENSP00000261615.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000261615.5Link to Ensembl Protein Viewer:ENSP00000261615.4Re-query CCDS DB by Nucleotide ID:ENST00000261615Re-query CCDS DB by Protein ID:ENSP00000261615
Original member Current member EBI ENST00000393092.7 ENSP00000376807.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393092.7Link to Ensembl Protein Viewer:ENSP00000376807.3Re-query CCDS DB by Nucleotide ID:ENST00000393092Re-query CCDS DB by Protein ID:ENSP00000376807
Original member Current member EBI ENST00000421184.5 ENSP00000397313.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000421184.5Link to Ensembl Protein Viewer:ENSP00000397313.1Re-query CCDS DB by Nucleotide ID:ENST00000421184Re-query CCDS DB by Protein ID:ENSP00000397313
Original member Current member EBI ENST00000690203.1 ENSP00000508584.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000690203.1Link to Ensembl Protein Viewer:ENSP00000508584.1Re-query CCDS DB by Nucleotide ID:ENST00000690203Re-query CCDS DB by Protein ID:ENSP00000508584
Original member Current member NCBI NM_001128141.3 NP_001121613.1 Accepted alive Link to Nucleotide Sequence:NM_001128141.3Link to Protein Sequence:NP_001121613.1Re-query CCDS DB by Nucleotide ID:NM_001128141Re-query CCDS DB by Protein ID:NP_001121613Link to BLAST:NP_001121613.1
Original member Current member NCBI NM_001389466.1 NP_001376395.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001389466.1Link to Protein Sequence:NP_001376395.1Re-query CCDS DB by Nucleotide ID:NM_001389466Re-query CCDS DB by Protein ID:NP_001376395Link to BLAST:NP_001376395.1
Original member Current member NCBI NM_001389467.1 NP_001376396.1 Accepted alive Link to Nucleotide Sequence:NM_001389467.1Link to Protein Sequence:NP_001376396.1Re-query CCDS DB by Nucleotide ID:NM_001389467Re-query CCDS DB by Protein ID:NP_001376396Link to BLAST:NP_001376396.1
Original member Current member NCBI NM_001389468.1 NP_001376397.1 Accepted alive Link to Nucleotide Sequence:NM_001389468.1Link to Protein Sequence:NP_001376397.1Re-query CCDS DB by Nucleotide ID:NM_001389468Re-query CCDS DB by Protein ID:NP_001376397Link to BLAST:NP_001376397.1
Original member Current member NCBI NM_001389469.1 NP_001376398.1 Accepted alive Link to Nucleotide Sequence:NM_001389469.1Link to Protein Sequence:NP_001376398.1Re-query CCDS DB by Nucleotide ID:NM_001389469Re-query CCDS DB by Protein ID:NP_001376398Link to BLAST:NP_001376398.1
Original member Current member NCBI NM_004413.4 NP_004404.1 Accepted alive Link to Nucleotide Sequence:NM_004413.4Link to Protein Sequence:NP_004404.1Re-query CCDS DB by Nucleotide ID:NM_004413Re-query CCDS DB by Protein ID:NP_004404Link to BLAST:NP_004404.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001121613.1 411 P16444 411 100% 0 0
NP_001376395.1 411 P16444 411 100% 0 0
NP_001376396.1 411 P16444 411 100% 0 0
NP_001376397.1 411 P16444 411 100% 0 0
NP_001376398.1 411 P16444 411 100% 0 0
NP_004404.1 411 P16444 411 100% 0 0

Chromosomal Locations for CCDS 10982.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 89630411 89630514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89635908 89636040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89636264 89636396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89636533 89636683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89636866 89636935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89637204 89637380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89637468 89637552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89637632 89637707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89637836 89637971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89638052 89638222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1236 nt):
ATGTGGAGCGGATGGTGGCTGTGGCCCCTTGTGGCCGTCTGCACTGCAGACTTCTTTCGGGACGAGGCAG
AGAGGATCATGAGGGACTCCCCTGTCATTGATGGGCACAATGACCTCCCCTGGCAGCTGCTGGATATGTT
CAACAACCGGCTGCAGGACGAGAGGGCCAACCTGACCACCTTGGCCGGCACACACACCAACATCCCCAAG
CTGAGGGCCGGCTTTGTGGGAGGCCAGTTCTGGTCCGTGTACACGCCCTGCGACACCCAGAACAAAGACG
CCGTGCGGAGGACGCTGGAGCAGATGGACGTGGTCCACCGCATGTGCCGGATGTACCCGGAGACCTTCCT
GTATGTCACCAGCAGTGCAGGCATTCGGCAGGCCTTCCGGGAAGGGAAGGTGGCCAGCCTGATCGGCGTG
GAGGGCGGCCACTCCATTGACAGCAGTTTGGGCGTCCTGCGGGCACTCTATCAGCTGGGCATGCGGTACC
TGACCCTCACCCACAGCTGCAACACGCCCTGGGCTGACAACTGGCTGGTGGACACGGGAGACAGCGAGCC
CCAGAGCCAAGGCTTGTCACCCTTTGGGCAGCGTGTGGTGAAGGAGCTGAACCGTCTGGGGGTCCTCATC
GACTTGGCTCACGTGTCTGTGGCCACCATGAAGGCCACCCTGCAGCTGTCCAGAGCCCCGGTCATCTTCA
GCCACTCCTCGGCCTACAGCGTGTGCGCAAGCCGGCGCAACGTGCCTGACGACGTCCTGAGGCTGGTGAA
ACAGACAGACAGCCTGGTGATGGTGAACTTCTACAACAATTACATTTCCTGCACCAACAAGGCCAACCTG
TCCCAAGTGGCCGACCATCTGGATCACATCAAGGAGGTGGCAGGAGCCAGAGCCGTGGGTTTTGGTGGGG
ACTTTGATGGTGTTCCAAGGGTCCCTGAGGGGCTGGAGGACGTCTCCAAGTATCCAGACCTGATCGCTGA
GCTGCTCAGGAGGAACTGGACGGAGGCGGAGGTCAAGGGCGCACTGGCTGACAACCTGCTGAGGGTCTTC
GAGGCTGTGGAACAGGCCAGCAACCTCACACAGGCTCCCGAGGAGGAGCCCATCCCGCTGGACCAGCTGG
GTGGCTCCTGCAGGACCCATTACGGCTACTCCTCTGGGGCTTCCAGCCTCCATCGCCACTGGGGGCTCCT
GCTGGCCTCCCTCGCTCCCCTGGTCCTCTGTCTGTCTCTCCTGTGA

Translation (411 aa):
MWSGWWLWPLVAVCTADFFRDEAERIMRDSPVIDGHNDLPWQLLDMFNNRLQDERANLTTLAGTHTNIPK
LRAGFVGGQFWSVYTPCDTQNKDAVRRTLEQMDVVHRMCRMYPETFLYVTSSAGIRQAFREGKVASLIGV
EGGHSIDSSLGVLRALYQLGMRYLTLTHSCNTPWADNWLVDTGDSEPQSQGLSPFGQRVVKELNRLGVLI
DLAHVSVATMKATLQLSRAPVIFSHSSAYSVCASRRNVPDDVLRLVKQTDSLVMVNFYNNYISCTNKANL
SQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEGLEDVSKYPDLIAELLRRNWTEAEVKGALADNLLRVF
EAVEQASNLTQAPEEEPIPLDQLGGSCRTHYGYSSGASSLHRHWGLLLASLAPLVLCLSLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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