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Report for CCDS820.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
820.1 Public Homo sapiens 1 UBL4B 24 110 108 CCDS HistoryNCBI Gene:164153Re-query CCDS DB by CCDS ID:820.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 820.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000334179.5 ENSP00000334044.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000334179.5Link to Ensembl Protein Viewer:ENSP00000334044.3Re-query CCDS DB by Nucleotide ID:ENST00000334179Re-query CCDS DB by Protein ID:ENSP00000334044
Original member Current member NCBI NM_203412.2 NP_981957.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_203412.2Link to Protein Sequence:NP_981957.1Re-query CCDS DB by Nucleotide ID:NM_203412Re-query CCDS DB by Protein ID:NP_981957Link to BLAST:NP_981957.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_981957.1 174 Q8N7F7 174 100% 0 0

Chromosomal Locations for CCDS 820.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 110112535 110113059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (525 nt):
ATGTTCCTCACAGTCAAGCTGCTCCTGGGCCAGAGATGCAGTCTGAAGGTGTCAGGGCAAGAGAGTGTAG
CCACGCTGAAGAGACTGGTGTCCAGGCGGCTGAAGGTGCCTGAGGAGCAGCAGCACCTGCTTTTCCGTGG
CCAGCTCCTGGAGGATGACAAGCACCTCTCTGACTACTGCATTGGGCCCAATGCCTCTATCAATGTCATC
ATGCAGCCCTTGGAGAAGATGGCGCTAAAGGAGGCCCACCAGCCGCAGACCCAGCCCCTGTGGCACCAGC
TGGGACTGGTCCTAGCTAAACACTTTGAACCACAGGATGCCAAGGCCGTGCTGCAGCTGCTAAGGCAGGA
GCACGAGGAGCGCCTGCAGAAGATAAGCCTGGAGCACCTGGAGCAGCTGGCCCAGTACCTCCTGGCAGAG
GAGCCTCACGTGGAGCCAGCTGGAGAGAGGGAGCTTGAGGCGAAGGCACGGCCTCAGAGCTCCTGTGACA
TGGAGGAGAAGGAGGAGGCAGCAGCTGATCAGTAA

Translation (174 aa):
MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLLFRGQLLEDDKHLSDYCIGPNASINVI
MQPLEKMALKEAHQPQTQPLWHQLGLVLAKHFEPQDAKAVLQLLRQEHEERLQKISLEHLEQLAQYLLAE
EPHVEPAGERELEAKARPQSSCDMEEKEEAAADQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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