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Report for CCDS23924.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23924.1 Public Mus musculus 10 Adora2a 23 108 98 CCDS HistoryNCBI Gene:11540Re-query CCDS DB by CCDS ID:23924.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23924.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000105420.2 ENSMUSP00000101060.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000105420.2Link to Ensembl Protein Viewer:ENSMUSP00000101060.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000105420Re-query CCDS DB by Protein ID:ENSMUSP00000101060
Original member NCBI NM_001331095.1 NP_001318024.1 Updated not alive Link to Nucleotide Sequence:NM_001331095.1Link to Protein Sequence:NP_001318024.1Re-query CCDS DB by Nucleotide ID:NM_001331095Re-query CCDS DB by Protein ID:NP_001318024
Current member NCBI NM_001331095.2 NP_001318024.1 Accepted alive Link to Nucleotide Sequence:NM_001331095.2Link to Protein Sequence:NP_001318024.1Re-query CCDS DB by Nucleotide ID:NM_001331095Re-query CCDS DB by Protein ID:NP_001318024Link to BLAST:NP_001318024.1
Original member NCBI NM_001331096.1 NP_001318025.1 Updated not alive Link to Nucleotide Sequence:NM_001331096.1Link to Protein Sequence:NP_001318025.1Re-query CCDS DB by Nucleotide ID:NM_001331096Re-query CCDS DB by Protein ID:NP_001318025
Current member NCBI NM_001331096.2 NP_001318025.1 Accepted alive Link to Nucleotide Sequence:NM_001331096.2Link to Protein Sequence:NP_001318025.1Re-query CCDS DB by Nucleotide ID:NM_001331096Re-query CCDS DB by Protein ID:NP_001318025Link to BLAST:NP_001318025.1
Original member NCBI NM_009630.3 NP_033760.2 Updated not alive Link to Nucleotide Sequence:NM_009630.3Link to Protein Sequence:NP_033760.2Re-query CCDS DB by Nucleotide ID:NM_009630Re-query CCDS DB by Protein ID:NP_033760
Current member NCBI NM_009630.4 NP_033760.2 Accepted alive Link to Nucleotide Sequence:NM_009630.4Link to Protein Sequence:NP_033760.2Re-query CCDS DB by Nucleotide ID:NM_009630Re-query CCDS DB by Protein ID:NP_033760Link to BLAST:NP_033760.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001318024.1 410 Q60613 410 100% 0 0
NP_001318025.1 410 Q60613 410 100% 0 0
NP_033760.2 410 Q60613 410 100% 0 0

Chromosomal Locations for CCDS 23924.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 75326029 75326351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 75333027 75333936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1233 nt):
ATGGGCTCCTCGGTGTACATCATGGTGGAGCTGGCCATTGCTGTGCTGGCCATCCTGGGTAACGTGCTTG
TGTGCTGGGCCGTGTGGATCAACAGCAACCTGCAGAACGTCACCAACTTCTTCGTGGTATCTCTGGCGGC
GGCTGACATCGCGGTGGGCGTGCTCGCCATCCCATTCGCCATCACCATCAGCACTGGCTTCTGCGCTGCC
TGCCATGGCTGCCTCTTCTTCGCCTGCTTTGTCCTGGTCCTCACGCAGAGTTCCATCTTCAGCCTCTTGG
CTATTGCCATCGACAGATACATCGCCATCCGAATTCCACTCCGGTACAATGGCTTGGTGACGGGTATGAG
GGCGAAGGGCATCATTGCGATTTGCTGGGTGCTGTCATTCGCCATCGGCCTGACCCCCATGCTGGGCTGG
AACAACTGCAGTCAGAAAGATGAGAACTCCACAAAGACCTGCGGCGAGGGCCGGGTGACCTGTCTGTTTG
AGGACGTGGTACCCATGAATTACATGGTTTACTACAACTTCTTCGCTTTTGTGTTGCTCCCCCTCCTGCT
CATGCTGGCCATCTACCTAAGGATTTTTTTGGCAGCCCGGAGACAGCTGAAGCAGATGGAGAGCCAACCC
CTACCAGGGGAGCGGACTCGCTCCACACTGCAGAAGGAAGTCCACGCCGCCAAGTCCCTGGCCATCATCG
TGGGGCTCTTTGCCCTCTGCTGGTTGCCCCTGCACATCATCAACTGCTTCACCTTCTTCTGCTCCACGTG
CCAGCACGCCCCTCCTTGGCTCATGTACCTGGCCATCATCCTCTCCCACAGCAATTCCGTTGTCAACCCC
TTCATCTACGCCTACAGGATCCGGGAGTTCCGCCAGACCTTCCGGAAGATCATCCGAACCCACGTCCTGA
GGCGGCAGGAACCCTTCAGGGCAGGGGGTTCCAGTGCCTGGGCCTTGGCGGCTCACAGCACTGAGGGCGA
GCAGGTCAGCCTCCGCCTCAATGGCCACCCCCTGGGAGTATGGGCCAATGGGAGTGCTCCCCACTCTGGA
CGGCGGCCCAATGGCTACACCCTGGGGCCGGGAGGTGGAGGGAGCACCCAAGGGTCTCCTGGGGATGTAG
AGCTTCTTACCCAGGAGCACCAGGAAGGGCAAGAGCACCCTGGCCTAGGGGATCATCTGGCCCAGGGTAG
GGTAGGAACAGCCTCATGGTCTTCAGAGTTTGCCCCTTCCTGA

Translation (410 aa):
MGSSVYIMVELAIAVLAILGNVLVCWAVWINSNLQNVTNFFVVSLAAADIAVGVLAIPFAITISTGFCAA
CHGCLFFACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGMRAKGIIAICWVLSFAIGLTPMLGW
NNCSQKDENSTKTCGEGRVTCLFEDVVPMNYMVYYNFFAFVLLPLLLMLAIYLRIFLAARRQLKQMESQP
LPGERTRSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCSTCQHAPPWLMYLAIILSHSNSVVNP
FIYAYRIREFRQTFRKIIRTHVLRRQEPFRAGGSSAWALAAHSTEGEQVSLRLNGHPLGVWANGSAPHSG
RRPNGYTLGPGGGGSTQGSPGDVELLTQEHQEGQEHPGLGDHLAQGRVGTASWSSEFAPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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