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Report for CCDS4691.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4691.1 Public Homo sapiens 6 SFTA2 22 109 92 CCDS HistoryNCBI Gene:389376Re-query CCDS DB by CCDS ID:4691.1Re-query CCDS DB by GeneID:389376See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4691.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI,WTSI ENST00000359086.3 ENSP00000351989.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000359086.3Link to Ensembl Protein Viewer:ENSP00000351989.3Re-query CCDS DB by Nucleotide ID:ENST00000359086Re-query CCDS DB by Protein ID:ENSP00000351989
Original member NCBI NM_205854.2 NP_995326.1 Updated not alive Link to Nucleotide Sequence:NM_205854.2Link to Protein Sequence:NP_995326.1Re-query CCDS DB by Nucleotide ID:NM_205854Re-query CCDS DB by Protein ID:NP_995326
Current member NCBI NM_205854.3 NP_995326.1 Accepted alive Link to Nucleotide Sequence:NM_205854.3Link to Protein Sequence:NP_995326.1Re-query CCDS DB by Nucleotide ID:NM_205854Re-query CCDS DB by Protein ID:NP_995326Link to BLAST:NP_995326.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_995326.1 78 Q6UW10 78 100% 0 0

Chromosomal Locations for CCDS 4691.1

Assembly GRCh38.p12 (GCF_000001405.38)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 30931488 30931574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30931707 30931795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30932036 30932096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (237 nt):
ATGGGGTCTGGGCTGCCCCTTGTCCTCCTCTTGACCCTCCTTGGCAGCTCACATGGAACAGGGCCGGGTA
TG
ACTTTGCAACTGAAGCTGAAGGAGTCTTTTCTGACAAATTCCTCCTATGAGTCCAGCTTCCTGGAATT
G
CTTGAAAAGCTCTGCCTCCTCCTCCATCTCCCTTCAGGGACCAGCGTCACCCTCCACCATGCAAGATCT
CAA
CACCATGTTGTCTGCAACACATGA


Translation (78 aa):
MGSGLPLVLLLTLLGSSHGTGPGMTLQLKLKESFLTNSSYESSFLELLEKLCLLLHLPSGTSVTLHHARS
Q
HHVVCNT




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser