NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS9968.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9968.1 Public Homo sapiens 14 WDR20 24 110 108 CCDS HistoryNCBI Gene:91833Re-query CCDS DB by CCDS ID:9968.1Re-query CCDS DB by GeneID:91833See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9968.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335263.9 ENSP00000335434.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000335263.9Link to Ensembl Protein Viewer:ENSP00000335434.5Re-query CCDS DB by Nucleotide ID:ENST00000335263Re-query CCDS DB by Protein ID:ENSP00000335434
Original member Current member NCBI NM_181291.3 NP_851808.1 Accepted alive Link to Nucleotide Sequence:NM_181291.3Link to Protein Sequence:NP_851808.1Re-query CCDS DB by Nucleotide ID:NM_181291Re-query CCDS DB by Protein ID:NP_851808Link to BLAST:NP_851808.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_851808.1 581 Q8TBZ3-2 581 100% 0 0

Chromosomal Locations for CCDS 9968.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 102139924 102140172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 102194938 102195120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 102208603 102209862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 102222830 102222883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1746 nt):
ATGGCGACGGAGGGAGGAGGGAAGGAGATGAACGAGATTAAGACCCAATTCACCACCCGGGAAGGTCTGT
AC
AAGCTGCTGCCGCACTCGGAGTACAGCCGGCCCAACCGGGTGCCCTTCAACTCGCAGGGATCCAACCC
T
GTCCGCGTCTCCTTCGTAAACCTCAACGACCAGTCTGGCAACGGCGACCGCCTCTGCTTCAATGTGGGC
CGG
GAGCTGTACTTCTATATCTACAAGGGGGTCCGCAAGGCTGCTGACTTGAGTAAACCAATAGATAAAA
GG
ATATACAAAGGAACACAGCCTACTTGTCATGACTTCAACCACCTAACAGCCACAGCAGAAAGTGTCTC
T
CTCCTAGTGGGCTTTTCCGCAGGCCAAGTCCAGCTTATAGACCCAATCAAAAAAGAAACTAGCAAACTT
TTT
AATGAGGAAAGACTAATAGACAAGTCACGAGTTACCTGTGTCAAATGGGTTCCCGGTTCGGAAAGCC
TT
TTCCTAGTAGCCCACTCGAGTGGGAACATGTACTTATATAATGTGGAGCACACTTGTGGCACCACAGC
C
CCCCACTACCAGCTTCTGAAGCAGGGAGAGAGCTTTGCCGTGCACACTTGCAAGAGCAAATCCACGAGG
AAC
CCTCTCCTTAAGTGGACGGTGGGCGAGGGGGCCCTCAACGAGTTTGCTTTCTCCCCAGATGGCAAGT
TC
TTAGCGTGCGTGAGCCAGGACGGGTTTCTGCGGGTGTTCAACTTTGACTCAGTGGAGCTGCACGGTAC
G
ATGAAAAGCTACTTTGGGGGCTTGCTGTGTGTGTGCTGGAGCCCGGATGGCAAGTACATCGTGACAGGT
GGG
GAGGACGACTTGGTGACAGTCTGGTCCTTTGTAGACTGCCGAGTAATAGCCAGAGGCCACGGGCACA
AG
TCCTGGGTCAGTGTTGTAGCGTTTGACCCTTATACCACTAGTGTAGAAGAAGGTGACCCTATGGAGTT
T
AGTGGCAGCGATGAGGACTTCCAAGACCTTCTTCATTTTGGCAGAGATCGAGCAAATAGTACACAGTCC
AGG
CTCTCCAAACGGAACTCTACAGACAGCCGCCCCGTAAGTGTCACGTATCGGTTTGGTTCCGTGGGCC
AG
GACACACAGCTCTGTTTATGGGACCTTACAGAAGATATCCTTTTCCCTCACCAACCCCTCTCAAGAGC
A
AGGACACACACAAATGTCATGAATGCCACGAGTCCTCCTGCTGGAAGCAATGGGAACAGTGTTACAACA
CCC
GGGAACTCTGTGCCGCCTCCTCTGCCACGGTCCAACAGCCTTCCACATTCAGCAGTCTCAAATGCTG
GC
AGCAAAAGCAGTGTCATGGACGGGGCCATTGCTTCTGGGGTCAGCAAATTTGCAACACTTTCACTACA
T
GACCGGAAGGAGAGGCACCACGAGAAAGATCACAAGCGAAATCATAGCATGGGACACATTTCTAGCAAG
AGC
AGTGACAAACTGAATCTAGTTACCAAAACCAAAACGGACCCTGCTAAAACTCTGGGAACGCCCCTGT
GT
CCTCGAATGGAAGATGTTCCCTTGTTAGAGCCGCTGATATGTAAAAAGATAGCACATGAGAGACTGAC
T
GTACTAATATTTCTTGAAGACTGTATAGTCACTGCTTGTCAGGAGGGATTTATTTGCACATGGGGAAGG
CCT
GGTAAAGTGGGCTCATTGTCATCCCCAAGCCAGGCCAGTTCTCCAGGTGGAACTGTAGTGTAG


Translation (581 aa):
MATEGGGKEMNEIKTQFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVG
R
ELYFYIYKGVRK
AADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKL
F
NEE
RLIDKSRVTCVKWVPGSESLFLVAHSSGNMYLYNVEHTCGTTAPHYQLLKQGESFAVHTCKSKSTR
N
PLLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKYIVTG
G
EDDLVTVWSFVDCRVIARGHGHKSWVSVVAFDPYTTSVEEGDPMEFSGSDEDFQDLLHFGRDRANSTQS
R
LSKRNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARTHTNVMNATSPPAGSNGNSVTT
P
GNSVPPPLPRSNSLPHSAVSNAGSKSSVMDGAIASGVSKFATLSLHDRKERHHEKDHKRNHSMGHISSK
S
SDKLNLVTKTKTDPAKTLGTPLCPRMEDVPLLEPLICKKIAHERLTVLIFLEDCIVTACQEGFICTWGR
P
GKV
GSLSSPSQASSPGGTVV



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser