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Report for CCDS89567.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89567.1 Public Mus musculus 2 Id1 23 108 98 CCDS HistoryNCBI Gene:15901Re-query CCDS DB by CCDS ID:89567.1Re-query CCDS DB by GeneID:15901See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89567.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000109824.1 ENSMUSP00000105449.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000109824.1Link to Ensembl Protein Viewer:ENSMUSP00000105449.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000109824Re-query CCDS DB by Protein ID:ENSMUSP00000105449
Original member Current member NCBI NM_001369018.1 NP_001355947.1 Accepted alive Link to Nucleotide Sequence:NM_001369018.1Link to Protein Sequence:NP_001355947.1Re-query CCDS DB by Nucleotide ID:NM_001369018Re-query CCDS DB by Protein ID:NP_001355947Link to BLAST:NP_001355947.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001355947.1 168 P20067-1 168 99.4048% 0 1

Chromosomal Locations for CCDS 89567.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 152736341 152736847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (507 nt):
ATGAAGGTCGCCAGTGGCAGTGCCGCAGCCGCTGCAGGCCCTAGCTGTTCGCTGAAGGCGGGCAGGACAG
CGGGCGAGGTGGTACTTGGTCTGTCGGAGCAAAGCGTGGCCATCTCGCGCTGCGCTGGGACGCGCCTGCC
CGCCTTGCTGGACGAGCAGCAGGTGAACGTCCTGCTCTACGACATGAACGGCTGCTACTCACGCCTCAAG
GAGCTGGTGCCCACCCTGCCCCAGAACCGCAAAGTGAGCAAGGTGGAGATCCTGCAGCATGTAATCGACT
ACATCAGGGACCTGCAGCTGGAGCTGAACTCGGAGTCTGAAGTCGGGACCACCGGAGGCCGGGGACTGCC
TGTCCGCGCCCCGCTCAGCACCCTGAACGGCGAGATCAGTGCCTTGGCGGCCGAGGTGAGGTCCGAGGCA
GAGTATTACATTATTCTTCAGTGGGAAACCGAGGCCACGGGAGGCGGGTGTCCCCCTTCCTTACTTTTCA
GGCGCATAGCTATTTAG

Translation (168 aa):
MKVASGSAAAAAGPSCSLKAGRTAGEVVLGLSEQSVAISRCAGTRLPALLDEQQVNVLLYDMNGCYSRLK
ELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEVGTTGGRGLPVRAPLSTLNGEISALAAEVRSEA
EYYIILQWETEATGGGCPPSLLFRRIAI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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