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Report for CCDS87546.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87546.1 Public Homo sapiens 7 ZC3HC1 24 110 108 CCDS HistoryNCBI Gene:51530Re-query CCDS DB by CCDS ID:87546.1Re-query CCDS DB by GeneID:51530See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87546.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000481503.5 ENSP00000418533.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000481503.5Link to Ensembl Protein Viewer:ENSP00000418533.1Re-query CCDS DB by Nucleotide ID:ENST00000481503Re-query CCDS DB by Protein ID:ENSP00000418533
Original member Current member NCBI NM_001363701.1 NP_001350630.1 Accepted alive Link to Nucleotide Sequence:NM_001363701.1Link to Protein Sequence:NP_001350630.1Re-query CCDS DB by Nucleotide ID:NM_001363701Re-query CCDS DB by Protein ID:NP_001350630Link to BLAST:NP_001350630.1

Chromosomal Locations for CCDS 87546.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 130018664 130018732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130022319 130022525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130023511 130023723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130024263 130024377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130026158 130026312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130028902 130029029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130039464 130039547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130040951 130041101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130049033 130049144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130051221 130051366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1380 nt):
ATGGCGGCGCCCTGTGAGGGACAAGCGTTTGCCGTAGGGGTTGAAAAGAATTGGGGTGCAGTAGTTCGCT
CCCCAGAAGGGACCCCCCAGAAAATCCGGCAGCTGATAGATGAGGGGATTGCCCCGGAAGAGGGAGGCGT
GGACGCGAAGGACACGTCTGCCACATCCCAGTCAGTTAATGGATCACCCCAAGCGGAACAACCTTCATTG
GAATCTACAAGCAAAGAAGCCTTCTTTAGCAGAGTGGAAACATTTTCTTCTTTGAAATGGGCAGGTAAGC
CCTTTGAGCTGTCTCCACTCGTCTGTGCAAAATATGGCTGGGTCACAGTGGAATGTGATATGCTCAAGTG
CTCTAGCTGTCAAGCTTTTCTCTGTGCCAGTTTACAACCAGCTTTTGACTTTGACAGATATAAGCAACGA
TGTGCTGAGCTGAAGAAAGCCTTGTGTACTGCCCATGAGAAGTTCTGTTTCTGGCCAGACAGCCCATCCC
CAGACCGATTTGGGATGTTGCCCCTGGATGAGCCTGCTATTCTTGTTAGTGAATTCCTAGATCGTTTTCA
AAGCCTTTGTCACTTGGACCTCCAGCTTCCTTCCCTAAGGCCGGAGGACTTGAAAACTATGTGCTTGACA
GAAGACAAGATCAGTCTTCTCCTACACTTGCTTGAAGATGAACTTGATCACCGAACTGATGAGAGAAAAA
CTACAATCAAATTAGGCTCAGACATCCAAGTCCACGTCACTGCCTGTATTCTCTCTGTGTGTGGCTGGGC
GTGTAGCTCCCCAATCCCAGGCCTTGAGGGGCGACCAGAGCGCTTACCTCTGGTGCCTGAATCTCCTCGG
AGGATGATGACCCGGAGCCAGGATGCCACTTTCTCCCCAGGCTCAGAGCAGGCTGAAAAGAGCCCTGGTC
CCATTGTCTCTCGAACTCGGAGCTGGGACTCTTCCAGTCCTGTTGACCGTCCTGAGCCAGAGGCTGCTAG
CCCCACCACCAGAACTCGCCCAGTGACCCGAAGCATGGGAACAGGAGACACCCCTGGCCTGGAGGTACCA
TCTAGCCCTCTGCGGAAAGCCAAGCGAGCTCGCCTCTGCTCCTCCAGCAGTTCGGACACATCTTCCCGAA
GCTTCTTTGATCCCACCTCTCAGCATAGAGACTGGTGCCCTTGGGTGAATATCACACTTGGCAAAGAAAG
CAGGGAGAATGGTGGAACTGAACCAGATGCCAGCGCCCCAGCAGAGCCAGGCTGGAAAGCAGTGCTGACC
ATCCTCTTGGCGCACAAACAGTCTAGCCAGCCAGCTGAAACGGACTCCATGAGTCTCTCTGAGAAATCAA
GGAAAGTATTCCGAATATTTCGGCAGTGGGAATCTCTGTGCTCATGCTGA

Translation (459 aa):
MAAPCEGQAFAVGVEKNWGAVVRSPEGTPQKIRQLIDEGIAPEEGGVDAKDTSATSQSVNGSPQAEQPSL
ESTSKEAFFSRVETFSSLKWAGKPFELSPLVCAKYGWVTVECDMLKCSSCQAFLCASLQPAFDFDRYKQR
CAELKKALCTAHEKFCFWPDSPSPDRFGMLPLDEPAILVSEFLDRFQSLCHLDLQLPSLRPEDLKTMCLT
EDKISLLLHLLEDELDHRTDERKTTIKLGSDIQVHVTACILSVCGWACSSPIPGLEGRPERLPLVPESPR
RMMTRSQDATFSPGSEQAEKSPGPIVSRTRSWDSSSPVDRPEPEAASPTTRTRPVTRSMGTGDTPGLEVP
SSPLRKAKRARLCSSSSSDTSSRSFFDPTSQHRDWCPWVNITLGKESRENGGTEPDASAPAEPGWKAVLT
ILLAHKQSSQPAETDSMSLSEKSRKVFRIFRQWESLCSC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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