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Report for CCDS8740.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8740.1 Public Homo sapiens 12 ZCRB1 24 110 108 CCDS HistoryNCBI Gene:85437Re-query CCDS DB by CCDS ID:8740.1Re-query CCDS DB by GeneID:85437See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8740.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000266529.8 ENSP00000266529.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000266529.8Link to Ensembl Protein Viewer:ENSP00000266529.3Re-query CCDS DB by Nucleotide ID:ENST00000266529Re-query CCDS DB by Protein ID:ENSP00000266529
Original member Current member EBI ENST00000677694.1 ENSP00000503171.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000677694.1Link to Ensembl Protein Viewer:ENSP00000503171.1Re-query CCDS DB by Nucleotide ID:ENST00000677694Re-query CCDS DB by Protein ID:ENSP00000503171
Original member Current member EBI ENST00000679269.1 ENSP00000503413.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679269.1Link to Ensembl Protein Viewer:ENSP00000503413.1Re-query CCDS DB by Nucleotide ID:ENST00000679269Re-query CCDS DB by Protein ID:ENSP00000503413
Original member Current member NCBI NM_033114.4 NP_149105.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033114.4Link to Protein Sequence:NP_149105.3Re-query CCDS DB by Nucleotide ID:NM_033114Re-query CCDS DB by Protein ID:NP_149105Link to BLAST:NP_149105.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_149105.3 217 Q8TBF4 217 100% 0 0

Chromosomal Locations for CCDS 8740.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 42313067 42313198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 42313690 42313765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 42313874 42313986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 42317340 42317447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 42317787 42317898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 42322418 42322446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 42324019 42324102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (654 nt):
ATGAGTGGTGGATTGGCTCCAAGTAAGAGCACAGTGTATGTATCCAACTTGCCTTTTTCCCTGACAAACA
AT
GACTTGTACCGGATATTTTCCAAGTATGGCAAAGTTGTAAAGGTTACCATCATGAAAGATAAAGATAC
C
AGGAAGAGTAAAGGGGTTGCATTTATTTTATTTTTGGATAAAGACTCTGCACAAAACTGTACCAGGGCA
ATA
AACAACAAACAGTTATTTGGTAGAGTGATAAAAGCAAGCATTGCTATTGACAATGGAAGAGCAGCTG
AG
TTCATCCGAAGGCGAAACTACTTTGATAAATCTAAGTGTTATGAATGTGGGGAAAGTGGACACTTAAG
T
TATGCCTGTCCGAAAAATATGCTCGGAGAACGTGAGCCTCCAAAGAAGAAAGAAAAAAAGAAAAAAAAG
AAA
GCTCCTGAACCAGAAGAAGAAATTGAGGAAGTAGAAGAAAGTGAAGATGAAGGGGAGGATCCTGCTC
TT
GACAGCCTCAGTCAGGCCATAGCATTCCAGCAAGCCAAAATTGAAGAAGAACAAAAAAAATGGAAACC
C
AGTTCAGGAGTCCCCTCAACATCAGATGATTCAAGACGCCCAAGGATAAAGAAAAGCACATATTTCAGT
GAT
GAGGAAGAACTTAGTGATTAA


Translation (217 aa):
MSGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTRA
I
NNKQ
LFGRVIKASIAIDNGRAAEFIRRRNYFDKSKCYECGESGHLSYACPKNMLGEREPPKKKEKKKKK
K
APEPEEE
IEEVEESEDEGEDPALDSLSQAIAFQQAKIEEEQKKWKPSSGVPSTSDDSRRPRIKKSTYFS
D
EEELSD




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser