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Report for CCDS85431.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85431.1 Public Mus musculus 7 Fgfr2 23 108 98 CCDS HistoryNCBI Gene:14183Re-query CCDS DB by CCDS ID:85431.1Re-query CCDS DB by GeneID:14183See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85431.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000117872.7 ENSMUSP00000113994.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000117872.7Link to Ensembl Protein Viewer:ENSMUSP00000113994.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000117872Re-query CCDS DB by Protein ID:ENSMUSP00000113994
Original member Current member NCBI NM_001347638.1 NP_001334567.1 Accepted alive Link to Nucleotide Sequence:NM_001347638.1Link to Protein Sequence:NP_001334567.1Re-query CCDS DB by Nucleotide ID:NM_001347638Re-query CCDS DB by Protein ID:NP_001334567Link to BLAST:NP_001334567.1

Chromosomal Locations for CCDS 85431.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 130163959 130164123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130167703 130167808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130169739 130169876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130171612 130171682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130172817 130172939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130177675 130177865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130180365 130180475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130182641 130182762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130185229 130185380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130196178 130196374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130198419 130198563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130200983 130201173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130218998 130219121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130228623 130228792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130261749 130261914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2172 nt):
ATGGGATTACCGTCCACGTGGAGATATGGAAGAGGACCAGGGATTGGCACTGTGACCATGGTCAGCTGGG
GGCGCTTCATCTGCCTGGTCTTGGTCACCATGGCAACCTTGTCCCTGGCCCGGCCCTCCTTCAGTTTAGT
TGAGGATACCACTTTAGAACCAGAAGGAGCACCGTACTGGACCAACACCGAGAAGATGGAGAAGCGGCTC
CACGCTGTCCCTGCCGCCAACACTGTGAAGTTCCGCTGTCCGGCTGGGGGGAATCCAACGCCCACAATGA
GGTGGTTAAAAAACGGGAAGGAGTTTAAGCAGGAGCATCGCATTGGAGGCTATAAGGTACGAAACCAGCA
CTGGAGCCTTATTATGGAAAGTGTGGTCCCGTCAGACAAAGGCAACTACACCTGCCTGGTGGAGAATGAA
TACGGGTCCATCAACCACACCTACCACCTCGATGTCGTTGAACGGTCACCACACCGGCCCATCCTCCAAG
CTGGACTGCCTGCAAATGCCTCCACGGTGGTCGGAGGGGATGTGGAGTTTGTCTGCAAGGTTTACAGCGA
TGCCCAGCCCCACATCCAGTGGATCAAGCACGTGGAAAAGAACGGCAGTAAATACGGGCCTGATGGGCTG
CCCTACCTCAAGGTCCTGAAGGCCGCCGGTGTTAACACCACGGACAAAGAGATTGAGGTTCTCTATATTC
GGAATGTAACTTTTGAGGATGCTGGGGAATATACGTGCTTGGCGGGTAATTCTATCGGGATATCCTTTCA
CTCTGCATGGTTGACAGTTCTGCCAGCGCCTGTGAGAGAGAAGGAGATCACGGCTTCCCCAGATTATCTG
GAGATAGCTATTTACTGCATAGGGGTCTTCTTAATCGCCTGCATGGTGGTGACAGTCATCTTTTGCCGAA
TGAAGACCACGACCAAGAAGCCAGACTTCAGCAGCCAGCCAGCTGTGCACAAGCTGACCAAGCGCATCCC
CCTGCGGAGACAGGTTTCGGCCGAGTCCAGCTCCTCCATGAACTCCAACACCCCGCTGGTGAGGATAACA
ACGCGTCTGTCCTCAACAGCGGACACCCCGATGCTAGCAGGGGTCTCCGAGTATGAGTTGCCAGAGGATC
CAAAGTGGGAATTCCCCAGAGATAAGCTGACGCTGGGCAAACCCCTGGGGGAAGGTTGCTTCGGGCAAGT
AGTCATGGCTGAAGCAGTGGGAATCGATAAAGACAAACCCAAGGAGGCGGTCACCGTGGCAGTGAAGATG
TTGAAAGATGATGCCACAGAGAAGGACCTGTCTGATCTGGTATCAGAGATGGAGATGATGAAGATGATTG
GGAAACATAAGAACATTATCAACCTCCTGGGGGCCTGCACGCAGGATGGACCTCTCTACGTCATAGTTGA
ATATGCATCGAAAGGCAACCTCCGGGAATACCTCCGAGCCCGGAGGCCACCTGGCATGGAGTACTCCTAT
GACATTAACCGTGTCCCCGAGGAGCAGATGACCTTCAAGGACTTGGTGTCCTGCACCTACCAGCTGGCTA
GAGGCATGGAGTACTTGGCTTCCCAAAAATGTATCCATCGAGATTTGGCTGCCAGAAACGTGTTGGTAAC
AGAAAACAATGTGATGAAGATAGCAGACTTTGGCCTGGCCAGGGATATCAACAACATAGACTACTATAAA
AAGACCACAAATGGGCGACTTCCAGTCAAGTGGATGGCTCCTGAAGCCCTTTTTGATAGAGTTTACACTC
ATCAGAGCGATGTCTGGTCCTTCGGGGTGTTAATGTGGGAGATCTTTACTTTAGGGGGCTCACCCTACCC
AGGGATTCCCGTGGAGGAACTTTTTAAGCTGCTCAAAGAGGGACACAGGATGGACAAGCCCACCAACTGC
ACCAATGAACTGTACATGATGATGAGGGATTGCTGGCATGCTGTACCCTCACAGAGACCCACATTCAAGC
AGTTGGTCGAAGACTTGGATCGAATTCTGACTCTCACAACCAATGAGGAATACTTGGATCTCACCCAGCC
TCTCGAACAGTATTCTCCTAGTTACCCCGACACAAGGAGCTCTTGTTCTTCAGGGGACGATTCTGTGTTT
TCTCCAGACCCCATGCCTTATGAACCCTGTCTGCCTCAGTATCCACACATAAACGGCAGTGTTAAAACAT
GA

Translation (723 aa):
MGLPSTWRYGRGPGIGTVTMVSWGRFICLVLVTMATLSLARPSFSLVEDTTLEPEGAPYWTNTEKMEKRL
HAVPAANTVKFRCPAGGNPTPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCLVENE
YGSINHTYHLDVVERSPHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGL
PYLKVLKAAGVNTTDKEIEVLYIRNVTFEDAGEYTCLAGNSIGISFHSAWLTVLPAPVREKEITASPDYL
EIAIYCIGVFLIACMVVTVIFCRMKTTTKKPDFSSQPAVHKLTKRIPLRRQVSAESSSSMNSNTPLVRIT
TRLSSTADTPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKM
LKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY
DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK
KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPTNC
TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLDLTQPLEQYSPSYPDTRSSCSSGDDSVF
SPDPMPYEPCLPQYPHINGSVKT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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