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Report for CCDS84213.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84213.1 Public Mus musculus 16 Eif4g1 23 108 98 CCDS HistoryNCBI Gene:208643Re-query CCDS DB by CCDS ID:84213.1Re-query CCDS DB by GeneID:208643See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84213.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000115463.7 ENSMUSP00000111123.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000115463.7Link to Ensembl Protein Viewer:ENSMUSP00000111123.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000115463Re-query CCDS DB by Protein ID:ENSMUSP00000111123
Original member NCBI NM_001304432.1 NP_001291361.1 Updated not alive Link to Nucleotide Sequence:NM_001304432.1Link to Protein Sequence:NP_001291361.1Re-query CCDS DB by Nucleotide ID:NM_001304432Re-query CCDS DB by Protein ID:NP_001291361
Current member NCBI NM_001304432.2 NP_001291361.1 Accepted alive Link to Nucleotide Sequence:NM_001304432.2Link to Protein Sequence:NP_001291361.1Re-query CCDS DB by Nucleotide ID:NM_001304432Re-query CCDS DB by Protein ID:NP_001291361Link to BLAST:NP_001291361.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001291361.1 1586 Q6NZJ6-2 1586 100% 0 0

Chromosomal Locations for CCDS 84213.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 20673902 20673961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20674228 20674314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20675344 20675520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20675730 20675829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20677686 20677798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20678582 20678674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20678884 20678950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20679213 20680025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20680713 20680801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20680890 20681076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20681183 20681316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20681420 20681578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20681737 20681922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20682042 20682239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20682659 20682805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20683418 20683654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20683812 20683916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20684022 20684181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20684429 20684508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20685511 20685613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20685859 20685955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20686151 20686377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20686513 20686631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20686760 20686932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20687150 20687275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20687381 20687462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20688539 20688637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20688731 20688865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20688971 20689052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20689192 20689332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20692247 20692431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4761 nt):
ATGAACAAAGCTCCCCAGCCCACAGGCCCCCCACCCGCCAGGTCCCCTGGACTCCCACAGCCAGCGTTTC
CC
CCGGGGCAGACTGCACCGGTGGTGTTTAGCACGCCTCAAGCGACACAAATGAACACGCCTTCTCAGCC
C
CGCCAGCACTTCTACCCTAGCCGGGCCCAGCCCCCTAGCAGTGCAGCCTCCCGAGTGCAGAGTGCAGCC
CCT
GCCCGTCCTGGCCCAGCTCCCCATGTCTACCCTGCTGGATCCCAAGTAATGATGATCCCTTCCCAGA
TC
TCCTACTCAGCCTCCCAAGGAGCCTACTATATCCCTGGACAGGGGCGTTCCACATATGTTGTCCCAAC
A
CAGCAGTACCCTGTGCAGCCAGGAGCCCCAGGCTTCTATCCAGGTGCAAGCCCTACCGAGTTTGGGACC
TAT
GCTGGAGCCTATTACCCAGCCCAAGGTGTGCAGCAGTTTCCTGCTAGTGTGGCTCCTGCCCCAGTTT
TG
ATGAACCAGCCACCCCAGATTGCTCCTAAGAGGGAACGGAAAACTATCCGAATTCGAGACCCAAACCA
A
GGAGGGAAGGATATCACAGAAGAGATCATGTCTGGGGCCCGCACTGCCTCCACACCCACTCCTCCCCAG
ACG
GGAGGCAGTCTGGAGCCTCAACCCAATGGGGAGTCGCCTCAGGTTGCTGTCATTATCCGGCCAGATG
AC
CGGTCGCAGGGAGCAGCCATTGGGGGGCGGCCAGGACTGCCTGGCCCAGAGCATAGCCCTGGCACAGA
A
TCTCAGCCTTCGTCGCCTTCTCCAACCCCATCACCACCCCCAATTTTGGAGCCGGGGTCTGAGTCTAAT
CTT
GGAGTCCTCTCTATTCCTGGGGACACTATGACAACAGGGATGATACCAATGTCTGTAGAAGAATCGA
CC
CCTATCTCTTGTGAAACTGGGGAGCCGTATTGCCTCTCTCCAGAACCCACTCTTGCCGAACCCATACT
G
GAAGTAGAAGTGACACTCAGCAAACCCATTCCAGAATCTGAGTTCTCTTCCAGTCCTCTCCAGGTTTCC
ACG
GCCCTGGTGCCTCACAAGGTTGAAACTCATGAGCCCAATGGCGTGATCCCATCTGAGGATCTGGAAC
CA
GAGGTGGAGTCAAGCACAGAGCCAGCTCCTCCCCCTCTATCACCTTGTGCTTCTGAATCGCTCGTGCC
C
ATTGCTCCAACTGCCCAGCCTGAGGAACTGCTCAACGGAGCCCCCTCACCACCAGCTGTGGATTTAAGC
CCA
GTCAGTGAGCCAGAGGAACAGGCCAAGAAGGTTTCATCAGCAGCACTGGCCAGCATTCTCTCTCCTG
CT
CCACCTGTGGCTCCTTCAGATACTTCTCCTGCTCAGGAGGAAGAAATGGAAGAAGATGACGATGACGA
A
GAAGGTGGAGAAGCTGAGAGTGAGAAGGGAGGAGAGGACGTCCCCCTTGACAGTACTCCTGTCCCAGCC
CAG
CTGTCTCAGAATTTAGAGGTGGCAGCAGCTACCCAGGTGGCAGTGTCTGTGCCAAAGAGGAGACGGA
AA
ATTAAAGAGCTAAATAAGAAGGAGGCTGTAGGAGACCTTCTAGATGCCTTCAAGGAGGTGGACCCAGC
A
GTACCAGAGGTAGAGAATCAGCCTCCCACTGGCAGCAACCCAAGCCCAGAGTCTGAGGGCAGCATGGTG
CCC
ACACAGCCTGAGGAAACAGAAGAAACCTGGGACTCTAAGGAAGACAAAATTCATAATGCTGAGAACA
TC
CAGCCTGGGGAGCAGAAGTATGAGTACAAGTCAGATCAGTGGAAGCCTCTAAACCTTGAAGAAAAGAA
G
CGTTATGACAGAGAATTCCTGCTGGGCTTTCAGTTCATCTTTGCCAGCATGCAGAAGCCAGAAGGATTG
CCC
CATATCACTGATGTGGTGCTGGACAAGGCCAATAAAACACCACTTCGGCAACTGGATCCCTCCAGAC
TA
CCTGGCATAAACTGTGGCCCAGATTTCACTCCATCTTTTGCCAATCTTGGCCGACCAGCCCTCAGCAA
C
CGTGGGCCCCCGAGGGGTGGGCCAGGTGGGGAGCTGCCCCGAGGGCCGGCTGGCCTGGGACCCAGGCGC
TCT
CAGCAGGGCCCACGAAAGGAAACTCGCAAGATCATTTCCTCAGTGATAATGACTGAAGACATAAAAC
TA
AATAAAGCAGAGAAGGCTTGGAAACCCAGTAGCAAACGGACAGCAGCTGATAAGGATCGAGGGGAAGA
G
GATGCTGATGGAAGCAAGACCCAGGACCTGTTCCGCAGGGTACGCTCCATCCTGAATAAGCTGACACCC
CAG
ATGTTTCAGCAGCTGATGAAGCAGGTGACACAGCTGGCCATTGACACGGAGGAACGCCTCAAAGGAG
TT
ATTGACCTCATCTTTGAGAAAGCCATTTCAGAGCCCAACTTCTCTGTGGCTTATGCCAACATGTGCCG
C
TGCCTCATGGCGCTGAAAGTGCCCACTACAGAAAAGCCAACAGTAACTGTGAATTTTCGAAAACTGTTG
TTA
AATCGGTGCCAGAAGGAATTTGAGAAAGACAAAGATGATGATGAAGTTTTTGAAAAAAAGCAAAAAG
AG
ATGGATGAAGCTGCTACGGCAGAAGAACGGGGACGCCTGAAAGAAGAGCTAGAAGAAGCCCGGGACAT
A
GCTAGGCGGCGCTCTTTAGGGAATATCAAGTTTATTGGAGAGTTATTCAAGTTGAAGATGTTAACAGAA
GCA
ATAATGCATGACTGTGTGGTCAAGCTACTTAAGAACCATGATGAGGAGTCCCTGGAATGCCTCTGCC
GC
CTCCTCACCACTATAGGCAAAGACCTGGACTTTGCAAAAGCCAAGCCTCGAATGGATCAGTATTTCAA
C
CAAATGGAAAAAATCATTAAAGAAAAGAAGACCTCATCTCGCATCCGTTTTATGCTGCAGGATGTACTC
GAT
CTGCGGCAGAGTAATTGGGTGCCACGCCGAGGGGATCAGGGTCCTAAGACTATTGATCAAATTCACA
AG
GAGGCTGAGATGGAAGAGCACCGAGAACATATTAAAGTACAGCAGCTCATGGCCAAGGGCAGCGACAA
A
CGTCGGGGTGGCCCTCCAGGCCCGCCTATCAATGATGGTGGCTGGAATACAGTCCCCATTAGCAAAGGC
AGT
CGCCCCATTGACACCTCACGGCTCACCAAGATCACAAAGCCTGGTTCCATTGATTCTAACAACCAGC
TT
TTTGCACCTGGAGGACGACTGAGTTGGGGCAAGGGCAGCAGTGGGGGCTCAGGAGCCAAGCCCTCAGA
C
ACAGCATCGGAAGCTACTCGTCCAGCTACCTTGAATCGCTTTTCTGCTCTTCAACAAACATTACCCGCA
GAG
AACACAGATAACAGACGTGTTGTACAGAGGAGTAGCTTGAGCCGGGAACGAGGTGAGAAAGCTGGGG
AC
CGGGGAGACCGACTAGAGCGGAGTGAGCGGGGAGGTGACCGTGGGGACCGACTTGATCGTGCCAGAAC
A
CCTGCCACCAAGCGAAGTTTTAGCAAAGAAGTGGAGGAGCGAAGTAGAGAGCGGCCATCCCAGCCTGAG
GGA
CTCCGCAAGGCAGCTAGCCTCACAGAGGATCGTGGTCGGGATCCTGTGAAGCGGGAAGCCACTCTAC
CT
CCAGTGAGCCCTCCAAAGGCTGCGCTGTCTGTGGATGAGGTGGAGAAGAAATCTAAGGCCATCATTGA
G
GAATATCTCCATCTCAATGACATGAAGGAGGCAGTACAGTGTGTCCAGGAGCTGGCTTCACCCTCCTTG
CTC
TTCATCTTCGTACGGCTTGGTATCGAGTCCACGCTGGAGCGTAGTACCATTGCTCGTGAGCATATGG
GG
CGACTACTGCACCAACTGCTCTGTGCGGGGCACCTCTCTACTGCCCAGTACTATCAAGGGCTGTATGA
A
ACACTAGAATTGGCTGAGGACATGGAAATTGATATCCCTCATGTATGGCTTTACCTGGCAGAACTGATT
ACA
CCTATTCTCCAGGAAGATGGGGTGCCCATGGGAGAGCTCTTCAGGGAAATTACGAAGCCTCTGAGAC
CC
ATGGGCAAAGCTACTTCTTTATTGCTGGAGATCCTGGGTCTCTTATGCAAGAGCATGGGTCCCAAAAA
G
GTGGGGATGCTGTGGCGAGAGGCTGGGCTGAGCTGGAGGGAATTTCTAGCAGAGGGCCAAGACGTTGGC
TCA
TTTGTGGCTGAAAAGAAGGTGGAATATACCTTGGGAGAAGAATCTGAAGCTCCTGGCCAGAGGACAC
TT
GCCTTTGAGGAGCTTCGTAGGCAGCTAGAGAAGCTGCTGAAGGACGGCGGCAGTAATCAGCGTGTGTT
C
GACTGGATAGACGCCAACCTAAATGAGCAGCAGATAGCATCCAATACATTAGTTCGAGCCCTCATGACA
ACT
GTCTGTTATTCTGCAATTATCTTTGAGACTCCTCTCCGAGTGGATGTTCAAGTGTTGAAAGTGCGAG
CA
AGACTGCTGCAGAAATACCTGTGTGATGAGCAGAAGGAGCTACAAGCACTCTATGCTCTCCAGGCCCT
T
GTAGTGACCTTAGAACAGCCTGCCAACCTGCTTCGGATGTTCTTTGATGCTCTATATGATGAGGACGTG
GTG
AAGGAAGACGCCTTCTACAGCTGGGAGAGCAGCAAGGATCCTGCTGAACAGCAGGGCAAGGGTGTGG
CC
CTTAAATCTGTCACAGCATTCTTCAATTGGCTTCGTGAGGCTGAGGACGAGGAGTCTGATCACAACTG
A


Translation (1586 aa):
MNKAPQPTGPPPARSPGLPQPAFPPGQTAPVVFSTPQATQMNTPSQPRQHFYPSRAQPPSSAASRVQSAA
P
ARPGPAPHVYPAGSQVMMIPSQISYSASQGAYYIPGQ
GRSTYVVPTQQYPVQPGAPGFYPGASPTEFGT
Y
AGAYYPAQGVQQFPASVAPAPVLMNQPPQIAPKRERKTIRIRDPNQGGKDITEEIMSGARTASTPTPPQ
T
GGSLEPQPNGESPQVAVIIRP
DDRSQGAAIGGRPGLPGPEHSPGTESQPSSPSPTPSPPPILEPGSESN
L
GVLSIPGDTMTTGMIPMSVEESTPISCETGEPYCLSPEPTLAEPILEVEVTLSKPIPESEFSSSPLQVS
T
ALVPHKVETHEPNGVIPSEDLEPEVESSTEPAPPPLSPCASESLVPIAPTAQPEELLNGAPSPPAVDLS
P
VSEPEEQAKKVSSAALASILSPAPPVAPSDTSPAQEEEMEEDDDDEEGGEAESEKGGEDVPLDSTPVPA
Q
LSQNLEVAAATQ
VAVSVPKRRRKIKELNKKEAVGDLLDAFKEVDPAVPEVENQPPTGSNPSPESEGSMV
P
TQPEETEETWDSKEDKIHNAENIQPGEQKYEYKS
DQWKPLNLEEKKRYDREFLLGFQFIFASMQKPEGL
P
HITDVVLDK
ANKTPLRQLDPSRLPGINCGPDFTPSFANLGRPALSNRGPPRGGPGGELPRGPAGLGPRR
S
QQGPRKETRKIISSVIMTEDIKLNKAEKAWKPSSKRTAADKDRGEEDADGSKTQ
DLFRRVRSILNKLTP
Q
MFQQLMKQVTQLAIDTEERLKGVIDLIFEKAISEPNFSVAYANMCRCLMA
LKVPTTEKPTVTVNFRKLL
L
NRCQKEFEKDKDDDEVFEKKQKEMDEAAT
AEERGRLKEELEEARDIARRRSLGNIKFIGELFKLKMLTE
A
IMHDCVVKLLKNHDEESLECLCRLLTTIGKDLDFAKAK
PRMDQYFNQMEKIIKEKKTSSRIRFMLQDVL
D
LRQ
SNWVPRRGDQGPKTIDQIHKEAEMEEHREHIKVQQLMAKGSDKRRGGPPGPPINDGGWNTVPISKG
S
RPIDTSRLTKITK
PGSIDSNNQLFAPGGRLSWGKGSSGGSGAKPSDTASEATRPATLNRFSALQQTLPA
E
NTDNRRVVQ
RSSLSRERGEKAGDRGDRLERSERGGDRGDRLDRARTPATKRSFSKEVEERSRERPSQPE
G
LRKAASLTEDRGRDP
VKREATLPPVSPPKAALSVDEVEKKSKAIIEEYLHLNDMKEAVQCVQELASPSL
L
FIFVRLGIESTLERSTIAREHMGRLLHQLLCAGHLSTAQYYQ
GLYETLELAEDMEIDIPHVWLYLAELI
T
PILQEDGVPMGELF
REITKPLRPMGKATSLLLEILGLLCKSMGPKKVGMLWREAGLSWREFLAEGQDVG
S
FVAEK
KVEYTLGEESEAPGQRTLAFEELRRQLEKLLKDGGSNQRVFDWIDANLNEQQIASNTLVRALMT
T
VCYSAII
FETPLRVDVQVLKVRARLLQKYLCDEQKELQALYALQALVVTLEQPANLLRMFFDALYDEDV
V
KEDAFYSWESSKDPAEQQGKGVALKSVTAFFNWLREAEDEESDHN




Links Key
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 Genome Browser Links:   Ensembl Genome Browser
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