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Report for CCDS83267.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83267.1 Public Homo sapiens 8 BNIP3L 24 110 108 CCDS HistoryNCBI Gene:665Re-query CCDS DB by CCDS ID:83267.1Re-query CCDS DB by GeneID:665See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83267.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000520409.5 ENSP00000428597.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000520409.5Link to Ensembl Protein Viewer:ENSP00000428597.1Re-query CCDS DB by Nucleotide ID:ENST00000520409Re-query CCDS DB by Protein ID:ENSP00000428597
Original member Current member EBI ENST00000523515.5 ENSP00000429698.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000523515.5Link to Ensembl Protein Viewer:ENSP00000429698.1Re-query CCDS DB by Nucleotide ID:ENST00000523515Re-query CCDS DB by Protein ID:ENSP00000429698
Original member Current member EBI ENST00000518611.5 ENSP00000429851.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000518611.5Link to Ensembl Protein Viewer:ENSP00000429851.1Re-query CCDS DB by Nucleotide ID:ENST00000518611Re-query CCDS DB by Protein ID:ENSP00000429851
Original member Current member NCBI NM_001330491.2 NP_001317420.1 Accepted alive Link to Nucleotide Sequence:NM_001330491.2Link to Protein Sequence:NP_001317420.1Re-query CCDS DB by Nucleotide ID:NM_001330491Re-query CCDS DB by Protein ID:NP_001317420Link to BLAST:NP_001317420.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317420.1 179 O60238-2 179 100% 0 0

Chromosomal Locations for CCDS 83267.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 26391263 26391426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 26395230 26395302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 26408000 26408103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 26408227 26408376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 26410364 26410412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (540 nt):
ATGAACAGCAGCAATGGCAATGATAATGGCAATGGGAAAAATGGGGGGCTGGAACACGTACCATCCTCAT
CC
TCCATCCACAATGGAGACATGGAGAAGATTCTTTTGGATGCACAACATGAATCAGGACAGAGTAGTTC
C
AGAGGCAGTTCTCACTGTGACAGCCCTTCGCCACAAGAAGATGGGCAGATCATGTTTGATGTGGAAATG
CAC
ACCAGCAGGGACCATAGCTCTCAGTCAGAAGAAGAAGTTGTAGAAGGAGAGAAGGAAGTCGAGGCTT
TG
AAGAAAAGTGCGGACTGGGTATCAGACTGGTCCAGTAGACCCGAAAACATTCCACCCAAGGAGTTCCA
C
TTCAGACACCCTAAACGTTCTGTGTCTTTAAGCATGAGGAAAAGTGGAGCCATGAAGAAAGGGGGTATT
TTC
TCCGCAGAATTTCTGAAGGTGTTCATTCCATCTCTCTTCCTTTCTCATGTTTTGGCTTTGGGGCTAG
G
C
ATCTATATTGGAAAGCGACTGAGCACACCCTCTGCCAGCACCTACTGA


Translation (179 aa):
MNSSNGNDNGNGKNGGLEHVPSSSSIHNGDMEKILLDAQHESGQSSSRGSSHCDSPSPQEDGQIMFDVEM
H
TSRDHSSQ
SEEEVVEGEKEVEALKKSADWVSDWSSRPENIPPKEFHFRHPKRSVSLSMRKSGAMKKGGI
F
SAEFLKVFIPSLFLSHVLALGL
GIYIGKRLSTPSASTY



Links Key
 Links to:   History report
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 Genome Browser Links:   Ensembl Genome Browser
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