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Report for CCDS81334.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81334.1 Public Homo sapiens 1 KANK4 24 110 108 CCDS HistoryNCBI Gene:163782Re-query CCDS DB by CCDS ID:81334.1Re-query CCDS DB by GeneID:163782See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81334.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354381.3 ENSP00000346352.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000354381.3Link to Ensembl Protein Viewer:ENSP00000346352.3Re-query CCDS DB by Nucleotide ID:ENST00000354381Re-query CCDS DB by Protein ID:ENSP00000346352
Original member Current member NCBI NM_001320269.2 NP_001307198.1 Accepted alive Link to Nucleotide Sequence:NM_001320269.2Link to Protein Sequence:NP_001307198.1Re-query CCDS DB by Nucleotide ID:NM_001320269Re-query CCDS DB by Protein ID:NP_001307198Link to BLAST:NP_001307198.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001307198.1 367 Q5T7N3-2 367 100% 0 0

Chromosomal Locations for CCDS 81334.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 62238277 62238381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 62247472 62247672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 62253067 62253209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 62263092 62263311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 62266732 62266819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 62268287 62268505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 62271478 62271589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 62281549 62281564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1104 nt):
ATGGAGAAGACAGATGAGATCTCCCCATCGACCAGCCTTAAATCCATAATGAAAAAGAAAGACTATGGCT
TC
CGTGCAGGAGGTAATGGGACCAAAAAGAACCTTCAGTTTGTTGGGGTTAACGGTGGGTATGAGACCAC
C
TCAAGTGAGGAGACCAGCGGTGAGGACAGCACCCCAGAGGACTTGTCTGACAGCGAGGCAGAGAAGAAG
TGT
GACGGCCCAGATCACAAGCATGTCAAAGATGCCCATCTCACCTGCGAGGCTGGGCAGGGCATCCCTG
AG
GGCACCTGCCATGCTGCCCAGGAAAGTGGGCCTGGGGAAGAAGTCCCCCACTCCAAGGCCGAGAGATA
T
AAACCCTCAGAAGAATTTCTTAATGCATGCCGGGCACTGAGCCAGCATCTGCCAGAAACTGGGACCACC
ACA
GACCAGCTCTTGAGGCAAAGCTTGAACACCATCAGTCAAGAGTGGTTCCGCGTCTCCAGCCGGAAGT
CG
TCTAGCCCCGCCGTGGTGGCCTCCTACCTCCACGAGGTCCAGCCTCACTCCCCACACTTCCTGAAACT
G
CTTGTCAACTTGGCCGATCACAACGGGAACACGGCCCTTCACTACAGCGTGTCCCACTCCAACTTCTCC
ATC
GTGAAGCTGCTGCTGGAGACAGGCGTCTGCAATGTGGACCATCAGAACAAAGCTGGCTACACTGCCG
TA
ATGATCACTCCCTTGGCTTCCGCAGAGACCAATGAAGACATGGCTGTTGTCTGGAAGCTCTTAAGAGA
A
GGAAATGTGAACATTCAAGCTACTCAGGGAGGCCAGACTGCGCTGATGCTGGGAGTCAGCCACGACAGG
GAG
GACATGGTTCAAGCGCTGCTTAGCTGCCAGGCAGATGTCAATCTGCAGGACCACGATGGATCCTCGG
CC
CTCATGGTGGCCTGTCACCATGGCAACGTGGACCTGGTGCGGCTGCTCCTGGCACACCCAGCCTGCGA
C
AGCAGCCTGACTGACAAGGCTGGCCGCACAGCTTTGTCCATCGCTCTGAAGTCACCCACCCATATGGAA
ATT
GCTGGGCTTCTGAGAGCCCACGCGGAGCAGGGCAGGTCCCTGGGGCTGTAG


Translation (367 aa):
MEKTDEISPSTSLKSIMKKKDYGFRAGGNGTKKNLQFVGVNGGYETTSSEETSGEDSTPEDLSDSEAEKK
C
DGPDHKHVKDAHLTCEAGQGIPEGTCHAAQESGPGEEVPHSKAE
RYKPSEEFLNACRALSQHLPETGTT
T
DQLL
RQSLNTISQEWFRVSSRKSSSPAVVASYLHEVQPHSPHFLKLLVNLADHNGNTALHYSVSHSNFS
I
VKLLLET
GVCNVDHQNKAGYTAVMITPLASAETNEDMAVVWKLLREGNVNIQATQGGQTALMLGVSHDR
E
DMVQALLSCQADVNLQDHDGSSALMVACHHGNVDLVRLLLAHPACDSSLTDK
AGRTALSIALKSPTHME
I
AGLLRAHAEQGRSLGL




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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