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Report for CCDS75838.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75838.1 Public Homo sapiens 9 SPATA31A7 24 110 108 CCDS HistoryNCBI Gene:26165Re-query CCDS DB by CCDS ID:75838.1Re-query CCDS DB by GeneID:26165See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75838.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000619167.2 ENSP00000484807.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000619167.2Link to Ensembl Protein Viewer:ENSP00000484807.1Re-query CCDS DB by Nucleotide ID:ENST00000619167Re-query CCDS DB by Protein ID:ENSP00000484807
Original member Current member NCBI NM_015667.2 NP_056482.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015667.2Link to Protein Sequence:NP_056482.2Re-query CCDS DB by Nucleotide ID:NM_015667Re-query CCDS DB by Protein ID:NP_056482Link to BLAST:NP_056482.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056482.2 1347 Q8IWB4 1347 100% 0 0

Chromosomal Locations for CCDS 75838.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 61190065 61190253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 61191453 61191510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 61192079 61192139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 61192395 61196130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4044 nt):
ATGGAGAATCTTCCCTTTCCTTTAAAATTACTTAGTGCCTCATCGCTAAACGCCCCCAGTTCCACACCAT
GGGTGTTGGATATCTTCCTCACTTTGGTGTTTGCCCTGGGGTTCTTCTTCCTATTACTCCCCTACTTATC
TTACTTCCGTTGTGATGACCCACCCTCACCATCGCCTGGGAAGAGAAAGTGTCCAGTAGGGCGGAGGCGG
AGGCCCAGAGGCAGGATGAAAAACCACAGTCTGAGAGCTGGTAGAGAGTGCCCGAGAGGCCTGGAGGAGA
CTTCGGACCTGCTTTCACAACTGCAGAGCCTCCTGGGGCCACACCTTGACAAAGGTGACTTTGGTCAGCT
CTCCGGTCCAGACCCCCCAGGTGAGGTGGGTGAAAGAGCACCTGATGGAGCCTCCCAGTCCTCTCATGAG
CCTATGGAAGATGCTGCTCCCATTCTCTCCCCGTTAGCTTCCCCGGATCCTCAAGCCAAGCATCCTCAGG
ATCTGGCCTCCACCCCATCACCAGGCCCAATGACCACCTCAGTCTCCTCCCTAAGTGCCTCCCAGCCACC
AGAACCTTCCCTTCCCCTAGAACACCCCTCACCCGAGCCACCTGCACTTTTCCCTCACCCACCACACACC
CCTGATCCTCTGGCCTGCTCTCTGCCTCCTCCAAAAGGCTTCACTGCTCCTCCCCTGCGGGACTCCACAC
TGATAACTCCATCTCACTGTGACTCAGTGGCATTTCCACTGGGCACCGTCCCTCAAAGCTTGTCTCCACA
TGAGGATTTGGTGGCTTCTGTCCCAGCCATCTCAGGCCTTGGTGGCTCAAACAGTCATGTTTCTGCCTCC
TCCCGGTGGCAGGAGACTGCCAGAACCTCGTGCGCCTTTAACTCATCAGTCCAGCAAGATCATCTTTCCC
GCCACCCACCAGAGACCTGTCAGATGGAAGCTGGTAGCCTGTTTTTGCTCAGCTCTGATGGCCAGAATGT
CGTGGGGATACAAGTCACAGAAACAGCCAAGGTCAACATTTGGGAAGAAAAAGAAAATGTTGGATCATTT
ACAAATCGAATGACCCCAGAAAAGCACTTAAATTATTTGCGGAATTTGGCTAAATCATTGGATGCTGAGC
AGGACACCACAAACCCAAAACCCTTCTGGAACATGGGAGAGAACTCGAAACAGCTGCCCGGACCTCAGAA
GCTCTCAGATCCTAGGCTCTGGCAGGAAAGTTTTTGGAAGAATTATAGCCAGCTTTTCTGGGGCCTCCCC
TCTCTGCACAGCGAGTCCCTGGTGGCTAACGCCTGGGTAACTGACAGGTCTTATACTTTACAGTCTCCTC
CTTTCTTGTTCAATGAAATGTCCAATGTCTGCCCAATTCAAAGGGAGACTACAATGTCCCCACTGCTTTT
CCAGGCCCAGCCCCTGTCCCATCTGGGGCCCGAGTGCCAACCCTTTATTTCATCCACACCCCAATTCCGG
CCCACACCTATGGCTCAGGCCGAGGCTCAGGCCCATCTTCAATCTTCTTTCCCAGTCCTATCTCCTGCTT
TTCCATCCCTGATTCAGAACACTGGAGTAGCTTGCCCTGCATCGCAGAATAAAGTGCAAGCTCTCTCCCT
ACCTGAAACTCAGCACCCTGAATGGCCTTTGTTGAGGAGACAACTAGAAGGTAGGTTGGCTTTACCCTCT
AGGGTCCAAAAATCTCAGGACGTCTTTAGTGTCTCCACTCCTAACCTTCCCCAGGAAAGTTTGACATCCA
TTCTGCCTGAGAACTTTCCAGTCAGTCCTGAACTCCGGAGACAACTGGAGCAACACATAAAAAAGTGGAT
CATCCAACACTGGGGCAACCTGGGAAGGATCCAAGAGTCTCTGGATCTGATGCAGCTTCGGGATGAATCA
CCAGGGACAAGTCAGGCCAAGGGCAAACCCAGTCCCTGGCAGTCCTCCATGTCCACAGGTGAAAGCAGCA
AGGAGGCACAGAAGGTGAAGTTCCAGCTAGAGAGGGACCCGTGCCCACATCTGGGGCAAATTCTGGGTGA
GACCCCACAAAATCTATCCAGGGATATGAAAAGCTTCCCACGGAAGGTTCTGGGGGTGACTTCTGAGGAG
TTGGAAAGGAACTTGAGGAAGCCCTTGAGGAGTGACTCGGGAAGTGATTTATTAAGATGCACAGAGAGGA
CTCATATAGAAAACATCCTGAAAGCCCACATGGGCAGGAACTTGGGCCAGACCAACGAGGGCTTGATCCC
CGTGTGTGTGCGTCGATCCTGGCTTGCTGTCAACCAGGCTCTTCCCGTGTCCAACACCCATGTGAAAACC
AGCAATCTAGCAGCCCCGAAAAGTGGGAAAGCCTGTGTGAACACAGCCCAGGTGCTTTCCTTCCTCGAGC
CGTGTACTCAGCAGGGGTTGGGAGCCCATATTGTGAGGTTTTGGGCCAAACACAGGTGGGGTCTACCCCT
CAGGGTCCTCAAGCCCATTCAGTGCTTTAAACTGGAAAAGGTTTCATCCTTGTCCCTTACACAGCTTGCT
GGTCCCTCCTCAGCCACCTGTGAATCTGGGGCTGGCTCAGAAGTTGAGGTGGACATGTTCCTTAGAAAGC
CACCAATGGCAAGTCTGAGAAAGCAGGTGCTGACCAAAGCATCTGATCACATGCCAGAGAGTCTTCTGGC
CTCCTCACCTGCATGGAAGCAGTTCCAGAGGGCACCGCGAGGAATCCCATCTTGGAATGATCATGAACCC
TTGAAGCCTCCTCCAGCTGGACAGGAGGGCAGGTGGCCATCTAAGCCCCTCACGTACAGCCTCACAGGCA
GCATCCAGCAGAGCAGGAGCTTAGGAGCCCAATCTTCAAAGGCTGGAGAGACAAGGGAGGCAGTGCCACA
ATGCAGAGTCCCCTTGGAAACCTGTATGCTGGCAAACCTCCAAGCCACAAGTGAGGATGTGCATGGTTTC
GAGGCTCCAGGGACCAGCAAAAGCTCTCTACACCCTAGAGTGTCTGTCTCCCAAGATCCAAGAAAGCTGT
GTCTTATGGAGGAGGTTGTTAATGAATTTGAGCCTGGAATGGCCACAAAGTCAGAGACCCAGCCTCAAGT
TTGTGCCGCTGTTGTGCTCCTTCCAGATGGGCAAGCATCTGTTGTGCCCCACGCTTCAGAGAATTTGGTT
TCTCAAGTGCCCCAGGGCCATCTCCAGAGCATGCCTACTGGGAACATGCGGGCTTCCCAGGAGCTACATG
ACCTCATGGCAGCCAGAAGGAGCAAACTGGTGCACGAGGAGCCCAGAAACCCAAACTGTCAAGGCTCATG
CAAGAGCCAAAGGCCAATGTTTCCCCCTATTCACAAGAGTGAGAAGTCTAGGAAACCCAACTTAGAAAAA
CATGAAGAAAGGCTTGAAGGATTGAGGACTCCTCAACTTACCCCAGTCAGGAAAACAGAAGACACCCATC
AGGATGAAGGCGTCCAGCTACTGCCATCAAAGAAACAGCCTCCTTCAGTAAGCCCCTTTGGAGAAAACAT
CAAGCAAATTTTTCAGTGGATTTTTTCAAAGAAAAAAAGCAAGCCAGCACCAGTCACTGCTGAGAGCCAA
AAAACAGTAAAAAACAGATCACGTGTGTACAGCAGCAGTGCTGAAGCTCAGGGTCTCATGACGGCAGTTG
GACAAATGCTGGACGAGAAAATGTCACTTTGCCATGCGCGCCATGCCTCGAAGGTAAATCAGCACAAACA
GAAGTTTCAAGCCCCAGTCTGTGGGTTTCCCTGCAACCACAGGCACCTCTTCTACTCAGAACACGGCAGA
ATACTGAGCTATGCAGCCAGCAGTCAACAAGCCACTCTCAAGAGCCAGGGTTGTCCCAACAGAGACAGAC
AAATCAGAAATCAACAGCCCTTGAAAAGTGTGCGGTGCAACAATGAGCAATGGGGCCTGCGACATCCCCA
AATCTTGCACCCCAAGAAAGCTGTATCCCCAGTCAGTCCCCCTCAGCACTGGCCGAAGACATCCGGTGCC
TCTAGCCACCATCACCACTGTCCAAGGCACTGTCTTCTTTGGGAAGGTATCTGA

Translation (1347 aa):
MENLPFPLKLLSASSLNAPSSTPWVLDIFLTLVFALGFFFLLLPYLSYFRCDDPPSPSPGKRKCPVGRRR
RPRGRMKNHSLRAGRECPRGLEETSDLLSQLQSLLGPHLDKGDFGQLSGPDPPGEVGERAPDGASQSSHE
PMEDAAPILSPLASPDPQAKHPQDLASTPSPGPMTTSVSSLSASQPPEPSLPLEHPSPEPPALFPHPPHT
PDPLACSLPPPKGFTAPPLRDSTLITPSHCDSVAFPLGTVPQSLSPHEDLVASVPAISGLGGSNSHVSAS
SRWQETARTSCAFNSSVQQDHLSRHPPETCQMEAGSLFLLSSDGQNVVGIQVTETAKVNIWEEKENVGSF
TNRMTPEKHLNYLRNLAKSLDAEQDTTNPKPFWNMGENSKQLPGPQKLSDPRLWQESFWKNYSQLFWGLP
SLHSESLVANAWVTDRSYTLQSPPFLFNEMSNVCPIQRETTMSPLLFQAQPLSHLGPECQPFISSTPQFR
PTPMAQAEAQAHLQSSFPVLSPAFPSLIQNTGVACPASQNKVQALSLPETQHPEWPLLRRQLEGRLALPS
RVQKSQDVFSVSTPNLPQESLTSILPENFPVSPELRRQLEQHIKKWIIQHWGNLGRIQESLDLMQLRDES
PGTSQAKGKPSPWQSSMSTGESSKEAQKVKFQLERDPCPHLGQILGETPQNLSRDMKSFPRKVLGVTSEE
LERNLRKPLRSDSGSDLLRCTERTHIENILKAHMGRNLGQTNEGLIPVCVRRSWLAVNQALPVSNTHVKT
SNLAAPKSGKACVNTAQVLSFLEPCTQQGLGAHIVRFWAKHRWGLPLRVLKPIQCFKLEKVSSLSLTQLA
GPSSATCESGAGSEVEVDMFLRKPPMASLRKQVLTKASDHMPESLLASSPAWKQFQRAPRGIPSWNDHEP
LKPPPAGQEGRWPSKPLTYSLTGSIQQSRSLGAQSSKAGETREAVPQCRVPLETCMLANLQATSEDVHGF
EAPGTSKSSLHPRVSVSQDPRKLCLMEEVVNEFEPGMATKSETQPQVCAAVVLLPDGQASVVPHASENLV
SQVPQGHLQSMPTGNMRASQELHDLMAARRSKLVHEEPRNPNCQGSCKSQRPMFPPIHKSEKSRKPNLEK
HEERLEGLRTPQLTPVRKTEDTHQDEGVQLLPSKKQPPSVSPFGENIKQIFQWIFSKKKSKPAPVTAESQ
KTVKNRSRVYSSSAEAQGLMTAVGQMLDEKMSLCHARHASKVNQHKQKFQAPVCGFPCNHRHLFYSEHGR
ILSYAASSQQATLKSQGCPNRDRQIRNQQPLKSVRCNNEQWGLRHPQILHPKKAVSPVSPPQHWPKTSGA
SSHHHHCPRHCLLWEGI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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