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Report for CCDS75570.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75570.1 Public Homo sapiens 7 FAM221A 24 110 108 CCDS HistoryNCBI Gene:340277Re-query CCDS DB by CCDS ID:75570.1Re-query CCDS DB by GeneID:340277See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75570.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409653.5 ENSP00000386900.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409653.5Link to Ensembl Protein Viewer:ENSP00000386900.1Re-query CCDS DB by Nucleotide ID:ENST00000409653Re-query CCDS DB by Protein ID:ENSP00000386900
Original member Current member NCBI NM_001300932.2 NP_001287861.1 Accepted alive Link to Nucleotide Sequence:NM_001300932.2Link to Protein Sequence:NP_001287861.1Re-query CCDS DB by Nucleotide ID:NM_001300932Re-query CCDS DB by Protein ID:NP_001287861Link to BLAST:NP_001287861.1

Chromosomal Locations for CCDS 75570.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 23680219 23680283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 23689269 23689459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 23691390 23691596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 23698192 23698299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 23700786 23700868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 23702096 23702164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (723 nt):
ATGGAGCGGTTGACGTTGCCTCTCGGCGGCGCGGCGGCGGTGGACGAGTACCTGGAGTACCGGAGGTATA
AA
CAACATAAAACTGACTTGGAAGCGATTCCTCAGCAGTGCCCCATTGATCTGCCCTGCCAAGTGACTGG
C
TGCCAGTGCAGGGCTTACCTTTATGTCCCCTTGAATGGTAGCCAGCCCATTCGCTGCAGGTGCAAACAC
TTT
GCTGATCAGCACAGTGCTGCGCCTGGCTTTACATGCAATACATGTTCCAAGTGTTCAGGATTCCATA
GC
TGCTTCACTTGTGCTTGTGGTCAGCCTGCATATGCCCATGACACAGTAGTGGAAACTAAGCAAGAAAG
A
TTGGCTCAGGAAAAACCAGTGGGACAGGACATTCCTTATGCAGCCATGGGAGGATTAACTGGTTTCAGC
TCG
CTGGCGGAAGGCTACATGCGGTTAGATGACAGTGGGATTGGTGTACCTTCAGTTGAATTTTTAGAAT
CT
CCCATTACGGCAGTAGACAGCCCATTCCTAAAAGCATTTCAAGCATCATCTAGTTCTTCTCCAGAAAC
G
TTAACAGATGTAGGTACAAGTAGTCAAGTTTCTTCATTAAGGAGACCTGAAGAGGATGATATGGCTTTC
TTT
GAAAGACGATACCAGGAAAGGATGAAAATGGAAAAGGCTGCTAAGTGGAAAGGAAAAGCTCCATTGC
CA
TCAGCTACAAAACCTTCATGA


Translation (240 aa):
MERLTLPLGGAAAVDEYLEYRRYKQHKTDLEAIPQQCPIDLPCQVTGCQCRAYLYVPLNGSQPIRCRCKH
F
ADQHSAAPGFTCNT
CSKCSGFHSCFTCACGQPAYAHDTVVETKQERLAQEKPVGQDIPYAAMGGLTGFS
S
LAEGYMRLDDSGI
GVPSVEFLESPITAVDSPFLKAFQASSSSSPETLTDVGTSSQVSSLRRPEEDDMAF
F
ERRYQER
MKMEKAAKWKGKAPLPSATKPS



Links Key
 Links to:   History report
  BLAST report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser