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Report for CCDS75388.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75388.1 Public Homo sapiens 6 NQO2 24 110 108 CCDS HistoryNCBI Gene:4835Re-query CCDS DB by CCDS ID:75388.1Re-query CCDS DB by GeneID:4835See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75388.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000380441.5 ENSP00000369806.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000380441.5Link to Ensembl Protein Viewer:ENSP00000369806.1Re-query CCDS DB by Nucleotide ID:ENST00000380441Re-query CCDS DB by Protein ID:ENSP00000369806
Original member Current member EBI ENST00000380454.8 ENSP00000369821.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000380454.8Link to Ensembl Protein Viewer:ENSP00000369821.4Re-query CCDS DB by Nucleotide ID:ENST00000380454Re-query CCDS DB by Protein ID:ENSP00000369821
Original member Current member NCBI NM_001290222.2 NP_001277151.1 Accepted alive Link to Nucleotide Sequence:NM_001290222.2Link to Protein Sequence:NP_001277151.1Re-query CCDS DB by Nucleotide ID:NM_001290222Re-query CCDS DB by Protein ID:NP_001277151Link to BLAST:NP_001277151.1

Chromosomal Locations for CCDS 75388.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 3006553 3006559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 3010025 3010189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 3012544 3012674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 3016884 3016985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 3019479 3019655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (582 nt):
ATGGCAGGTAAGAAAGTACTCATTGTCTATGCACACCAGGAACCCAAGTCTTTCAACGGATCCTTGAAGA
ATGTGGCTGTAGATGAACTGAGCAGGCAGGGCTGCACCGTCACAGTGTCTGATTTGTATGCCATGAACCT
TGAGCCGAGGGCCACAGACAAAGATATCACTGGTACTCTTTCTAATCCTGAGGTTTTCAATTATGGAGTG
GAAACCCACGAAGCCTACAAGCAAAGGTCTCTGGCTAGCGACATCACTGATGAGCAGAAAAAGGTTCGGG
AGGCTGACCTAGTGATATTTCAGGGTAAACTAGCGCTCCTTTCCGTAACCACGGGAGGCACGGCCGAGAT
GTACACGAAGACAGGAGTCAATGGAGATTCTCGATACTTCCTGTGGCCACTCCAGCATGGCACATTACAC
TTCTGTGGATTTAAAGTCCTTGCCCCTCAGATCAGCTTTGCTCCTGAAATTGCATCCGAAGAAGAAAGAA
AGGGGATGGTGGCTGCGTGGTCCCAGAGGCTGCAGACCATCTGGAAGGAAGAGCCCATCCCCTGCACAGC
CCACTGGCACTTCGGGCAATAA

Translation (193 aa):
MAGKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMNLEPRATDKDITGTLSNPEVFNYGV
ETHEAYKQRSLASDITDEQKKVREADLVIFQGKLALLSVTTGGTAEMYTKTGVNGDSRYFLWPLQHGTLH
FCGFKVLAPQISFAPEIASEEERKGMVAAWSQRLQTIWKEEPIPCTAHWHFGQ


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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