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Report for CCDS73643.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73643.1 Public Homo sapiens 14 GPHB5 24 110 108 CCDS HistoryNCBI Gene:122876Re-query CCDS DB by CCDS ID:73643.1Re-query CCDS DB by GeneID:122876See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73643.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000621500.2 ENSP00000478993.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000621500.2Link to Ensembl Protein Viewer:ENSP00000478993.1Re-query CCDS DB by Nucleotide ID:ENST00000621500Re-query CCDS DB by Protein ID:ENSP00000478993
Original member Current member EBI ENST00000314140.2 ENSP00000479431.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000314140.2Link to Ensembl Protein Viewer:ENSP00000479431.1Re-query CCDS DB by Nucleotide ID:ENST00000314140Re-query CCDS DB by Protein ID:ENSP00000479431
Original member Current member NCBI NM_145171.4 NP_660154.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145171.4Link to Protein Sequence:NP_660154.3Re-query CCDS DB by Nucleotide ID:NM_145171Re-query CCDS DB by Protein ID:NP_660154Link to BLAST:NP_660154.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_660154.3 130 Q86YW7 130 100% 0 0

Chromosomal Locations for CCDS 73643.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 63312928 63313116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63317646 63317849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (393 nt):
ATGAAGCTGGCATTCCTCTTCCTTGGCCCCATGGCCCTCCTCCTTCTGGCTGGCTATGGCTGTGTCCTCG
GTGCCTCCAGTGGGAACCTGCGCACCTTTGTGGGCTGTGCCGTGAGGGAGTTTACTTTCCTGGCCAAGAA
GCCAGGCTGCAGGGGCCTTCGGATCACCACGGATGCCTGCTGGGGTCGCTGTGAGACCTGGGAGAAACCC
ATTCTGGAACCCCCCTATATTGAAGCCCATCATCGAGTCTGTACCTACAACGAGACCAAACAGGTGACTG
TCAAGCTGCCCAACTGTGCCCCGGGAGTCGACCCCTTCTACACCTATCCCGTGGCCATCCGCTGTGACTG
CGGAGCCTGCTCCACTGCCACCACGGAGTGTGAGACCATCTGA

Translation (130 aa):
MKLAFLFLGPMALLLLAGYGCVLGASSGNLRTFVGCAVREFTFLAKKPGCRGLRITTDACWGRCETWEKP
ILEPPYIEAHHRVCTYNETKQVTVKLPNCAPGVDPFYTYPVAIRCDCGACSTATTECETI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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