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Report for CCDS61104.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
61104.1 Public Homo sapiens 12 PUS7L 24 110 108 CCDS HistoryNCBI Gene:83448Re-query CCDS DB by CCDS ID:61104.1Re-query CCDS DB by GeneID:83448See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 61104.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000431332.7 ENSP00000398497.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000431332.7Link to Ensembl Protein Viewer:ENSP00000398497.3Re-query CCDS DB by Nucleotide ID:ENST00000431332Re-query CCDS DB by Protein ID:ENSP00000398497
Original member Current member NCBI NM_001271826.2 NP_001258755.1 Accepted alive Link to Nucleotide Sequence:NM_001271826.2Link to Protein Sequence:NP_001258755.1Re-query CCDS DB by Nucleotide ID:NM_001271826Re-query CCDS DB by Protein ID:NP_001258755Link to BLAST:NP_001258755.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001258755.1 388 Q9H0K6-2 388 100% 0 0

Chromosomal Locations for CCDS 61104.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 43730376 43730702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 43731705 43731758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 43736381 43736661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 43738310 43738391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 43742457 43742555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 43746046 43746238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 43748450 43748580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1167 nt):
ATGTTTGAAGCGATTGGTTTTTTAGCTATCAAACTTGGTGTTATTCCTTCGGATTTTAGTTATGCAGGCC
TTAAAGACAAGAAAGCCATCACCTATCAAGCAATGGTTGTTAGAAAAGTGACTCCAGAGAGGTTGAAAAA
TATTGAAAAAGAAATTGAAAAGAAAAGAATGAATGTCTTTAATATTCGGTCTGTAGATGATTCCCTGAGA
CTTGGTCAGCTCAAAGGAAATCACTTTGATATTGTCATTAGAAATTTAAAAAAACAAATAAATGATTCTG
CAAACCTGAGGGAGAGAATTATGGAAGCAATAGAAAATGTTAAGAAAAAAGGCTTTGTGAATTACTATGG
ACCACAGAGATTTGGGAAGGGAAGGAAAGTTCACACAGACCAAATTGGACTAGCTTTGCTGAAGAATGAA
ATGATGAAAGCCATAAAATTGTTTCTTACACCAGAAGACTTGGATGATCCTGTAAATAGAGCAAAGAAGT
ATTTTCTTCAAACTGAGGATGCTAAAGGCACACTTTCATTGATGCCTGAATTCAAAGTGCGTGAGAGAGC
ATTGTTGGAGGCATTGCACCGCTTTGGCATGACCGAGGAAGGTTGTATCCAGGCATGGTTCTCTTTACCC
CATTCCATGCGCATATTCTATGTTCACGCATATACCAGCAAAATTTGGAATGAGGCAGTATCTTACAGAC
TTGAAACCTATGGAGCAAGAGTAGTGCAGGGTGATTTGGTCTGTTTGGATGAAGACATTGATGACGAGAA
TTTCCCAAATAGTAAAATTCACCTGGTAACTGAAGAGGAGGGATCAGCTAATATGTATGCAATACATCAG
GTGGTTCTTCCAGTACTTGGATACAATATTCAGTACCCGAAGAACAAAGTAGGGCAGTGGTACCATGACA
TACTTAGCAGAGATGGACTACAGACATGTAGGTTTAAAGTACCTACTCTGAAACTGAATATACCAGGTTG
CTATAGACAGATTTTGAAACATCCCTGTAATCTCTCATACCAACTAATGGAAGATCATGACATTGATGTC
AAAACGAAAGGTTCCCACATTGATGAAACAGCTTTGTCTCTTTTGATCTCTTTTGATCTTGATGCTTCAT
GCTATGCTACCGTTTGTCTGAAGGAAATAATGAAGCATGACGTTTAA

Translation (388 aa):
MFEAIGFLAIKLGVIPSDFSYAGLKDKKAITYQAMVVRKVTPERLKNIEKEIEKKRMNVFNIRSVDDSLR
LGQLKGNHFDIVIRNLKKQINDSANLRERIMEAIENVKKKGFVNYYGPQRFGKGRKVHTDQIGLALLKNE
MMKAIKLFLTPEDLDDPVNRAKKYFLQTEDAKGTLSLMPEFKVRERALLEALHRFGMTEEGCIQAWFSLP
HSMRIFYVHAYTSKIWNEAVSYRLETYGARVVQGDLVCLDEDIDDENFPNSKIHLVTEEEGSANMYAIHQ
VVLPVLGYNIQYPKNKVGQWYHDILSRDGLQTCRFKVPTLKLNIPGCYRQILKHPCNLSYQLMEDHDIDV
KTKGSHIDETALSLLISFDLDASCYATVCLKEIMKHDV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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