NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS5925.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5925.2 Public Homo sapiens 7 WDR86 24 110 108 CCDS HistoryNCBI Gene:349136Re-query CCDS DB by CCDS ID:5925.2Re-query CCDS DB by GeneID:349136See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 5925.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000334493.11 ENSP00000335522.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000334493.11Link to Ensembl Protein Viewer:ENSP00000335522.7Re-query CCDS DB by Nucleotide ID:ENST00000334493Re-query CCDS DB by Protein ID:ENSP00000335522
Original member Current member NCBI NM_198285.3 NP_938026.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198285.3Link to Protein Sequence:NP_938026.2Re-query CCDS DB by Nucleotide ID:NM_198285Re-query CCDS DB by Protein ID:NP_938026Link to BLAST:NP_938026.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_938026.2 376 Q86TI4-3 376 100% 0 0

Chromosomal Locations for CCDS 5925.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 151381582 151381746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 151381878 151381981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 151385088 151385223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 151395776 151396196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 151400100 151400241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 151409427 151409589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1131 nt):
ATGGGGGGCGGCGGGTCGGCCCTGAGGGTCTGCGCCGACCACCGCGGGGGCATCAACTGGCTGAGCCTGA
GCCCCGACGGGCAGCGCCTGCTGACGGGCAGCGAGGACGGCACGGCCCGGCTCTGGAGCACCGCGGACGG
CCAGTGCTGCGCGCTCCTGCAAGGACATGAAAGCTATGTGACCTTCTGCCAGCTGGAGGATGAGGCTGCC
TTCACATGCAGCGCCGACTGCACCATCAGGAGGTGGGACGTGCTGACCGGGCAGTGTCTGCAGGTGTACC
GAGGACACACGTCCATCGTGAACAGGATCCTGGTTGCCAACAACCAGCTCTTCAGCAGCTCCTATGACCG
GACAGCTCGGGTCTGGAGTGTGGACAAGGGGCAGATGTCCCGGGAGTTCCGGGGCCACCGCAACTGCGTG
CTGACCCTAGCCTACTCTGCCCCGTGGGACCTCCCCAGCACTCCCTGCGCGGAGGAGGCCGCGGCCGGGG
GGCTTCTGGTGACCGGCAGCACAGATGGCACAGCCAAGGTGTGGCAGGTGGCCAGCGGCTGCTGCCACCA
GACGCTGCGGGGCCACACGGGTGCAGTGCTGTGCCTAGTGCTAGACACGCCCGGCCACACGGCCTTCACA
GGCAGCACCGACGCCACCATCCGTGCCTGGGACATCCTGAGTGGGGAGCAGCTGCGGGTGTTCCGGGAGC
ACCGGGGCTCCGTCATCTGTCTGGAGCTGGTGAACCGACTCGTGTACTCTGGCAGCGCGGACAGGACCGT
CAAGTGCTGGCTGGCAGACACAGGGGAGTGTGTGCGCACGTTCACGGCCCACAGACGCAACGTGAGCGCC
CTCAAGTACCACGCGGGCACCTTGTTCACGGGCAGCGGGGACGCTTGCGCCCGGGCCTTCGACGCGCAGT
CTGGAGAGCTGCGGAGGGTGTTCCGGGGCCACACATTCATCATCAACTGCATCCAGGTGCACGGCCAGGT
GCTCTACACCGCCTCGCACGACGGCGCCCTGCGCCTCTGGGACGTGCGCGGGCTCCGAGGTGCCCCGCGG
CCCCCTCCGCCCATGCGCAGCCTCTCGCGGCTCTTCAGCAACAAGGTGGGCTGCGCCGCCGCGCCCCTGC
AGCCGGCCTGA

Translation (376 aa):
MGGGGSALRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAA
FTCSADCTIRRWDVLTGQCLQVYRGHTSIVNRILVANNQLFSSSYDRTARVWSVDKGQMSREFRGHRNCV
LTLAYSAPWDLPSTPCAEEAAAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFT
GSTDATIRAWDILSGEQLRVFREHRGSVICLELVNRLVYSGSADRTVKCWLADTGECVRTFTAHRRNVSA
LKYHAGTLFTGSGDACARAFDAQSGELRRVFRGHTFIINCIQVHGQVLYTASHDGALRLWDVRGLRGAPR
PPPPMRSLSRLFSNKVGCAAAPLQPA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH