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Report for CCDS59227.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59227.1 Public Homo sapiens 11 LRRC51 24 110 108 CCDS HistoryNCBI Gene:120356739Re-query CCDS DB by CCDS ID:59227.1Re-query CCDS DB by GeneID:120356739See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59227.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000324866.11 ENSP00000440693.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000324866.11Link to Ensembl Protein Viewer:ENSP00000440693.1Re-query CCDS DB by Nucleotide ID:ENST00000324866Re-query CCDS DB by Protein ID:ENSP00000440693
Original member Current member EBI ENST00000536917.2 ENSP00000443421.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000536917.2Link to Ensembl Protein Viewer:ENSP00000443421.1Re-query CCDS DB by Nucleotide ID:ENST00000536917Re-query CCDS DB by Protein ID:ENSP00000443421
Original member Current member NCBI NM_001271471.3 NP_001258400.1 Accepted alive Link to Nucleotide Sequence:NM_001271471.3Link to Protein Sequence:NP_001258400.1Re-query CCDS DB by Nucleotide ID:NM_001271471Re-query CCDS DB by Protein ID:NP_001258400Link to BLAST:NP_001258400.1

Chromosomal Locations for CCDS 59227.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 72089084 72089165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72093496 72093701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72094948 72095100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (441 nt):
ATGAACAAACGGGACTATATGAACACTTCGGTACAGGAGCCCCCTCTTGACTACTCCTTCAGAAGCATCC
ACGTCATTCAAGATCTGGTAAATGAGGAGCCAAGGACAGGACTACGACCACTGAAGCGTTCAAAGTCGGG
GAAATCACTGACCCAGTCCCTGTGGCTGAATAACAATGTTCTCAATGATCTGAGAGACTTCAACCAGGTG
GCTTCACAGCTGTTGGAGCACCCAGAGAACCTGGCCTGGATCGACCTGTCCTTTAATGACCTGACTTCCA
TTGACCCTGTCCTAACAACTTTCTTCAACCTGAGTGTCCTCTATCTTCACGGCAACAGCATCCAGCGCCT
GGGGGAGGTGAATAAGCTGGCTGTCCTTCCTCGGCTCCGTAGCCTGACACTCCATGGGAACCCCATGGAG
GAAGAGAAAGGGTATAGGTAA

Translation (146 aa):
MNKRDYMNTSVQEPPLDYSFRSIHVIQDLVNEEPRTGLRPLKRSKSGKSLTQSLWLNNNVLNDLRDFNQV
ASQLLEHPENLAWIDLSFNDLTSIDPVLTTFFNLSVLYLHGNSIQRLGEVNKLAVLPRLRSLTLHGNPME
EEKGYR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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