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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS53181.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
53181.1 |
Public |
Mus musculus |
X |
Pcdh19 |
23 |
108 |
98 |
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Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 53181.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000167944.7 |
ENSMUSP00000128313.1 |
Accepted |
alive |
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NCBI |
NM_001105246.1 |
NP_001098716.1 |
Accepted |
alive |
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Chromosomal Locations for CCDS 53181.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3294 nt): ATGGAGTCTCTCCTGCTGCCGGTGCTATTGCTGCTGGCTGTACTGTGGACGCAGGCGGCTGCCCTGATTA ACCTTAAATACTCGGTCGAAGAGGAGCAGCGCGCCGGGACGGTGATCGCTAACGTGGCCAAGGACGCGCG GGAGGCCGGCTTCGCGCTGGACCCCCGACAGGCTTCTGCTTTCCGCGTGGTGTCCAACTCGGCTCCGCAC CTGGTGGACATCAACCCCAGCTCGGGCCTCTTGGTCACCAAGCAGAAGATTGACCGAGACCTGCTGTGCC GCCAGAGCCCCAAGTGTATCATCTCGCTCGAGGTCATGTCCAGCTCAATGGAGATCTGTGTGATTAAGGT GGAGATCAAAGACCTGAACGACAATGCTCCCAGTTTTCCGGCCGCACAGATAGAGCTGGAGATCTCTGAG GCAGCCAGCCCCGGCACCCGCATCCCACTGGACAGTGCATATGACCCGGACTCCGGCAGCTTTGGTGTGC AGACCTACGAGCTCACGCCCAACGAGCTGTTTGGCCTGGAAATAAAGACGCGGGGTGACGGTTCGCGCTT TGCTGAACTGGTGGTGGAGAAGAGCCTGGACCGTGAGACACAGTCACATTACAGCTTTCGCATTACGGCT CTCGACGGAGGCGACCCACCACACATGGGCACAGTTGGCCTCAGCATCAAGGTGACCGATTCGAATGACA ACAACCCAGTGTTTGGCGAGTCCACCTACTCAGTGAGCGTGCCTGAAAATTCACCTCCCAATACACCCGT CATCCGCCTCAATGCCAGCGATCCAGATGAGGGCACCAATGGCCAAGTGGTCTATTCCTTCTATGGTTAT GTCAATGACCGTACGCGTGAACTCTTCCAAATTGACCCACACAGCGGCCTGGTCACCGTCACCGGTGCGC TAGACTATGAAGAGGGCCATGTGTACGAACTGGATGTGCAAGCCAAAGACCTGGGGCCCAACTCTATCCC TGCACACTGCAAAGTCACAGTCAGCGTACTTGATACTAATGACAACCCGCCAATTATCAACCTCCTGTCG GTCAATAGCGAGCTTGTGGAGGTGAGCGAGAGCGCCCCCCCGGGCTATGTGATTGCCCTGGTTCGGGTGT CTGATCGCGACTCCGGGCTCAATGGACGTGTGCAGTGCCGCTTGCTGGGCAATGTCCCCTTTCGACTGCA GGAGTATGAGAGCTTCTCCACTATTCTTGTGGATGGGAGGCTGGACCGAGAGCAGCATGACCAGTACAAT CTCACTATTCAGGCTCGAGACAGCGGTGTGCCTATGCTGCAGAGTGCCAAGTCGTTCACTGTGCGTATCA CAGATGAGAATGACAACCACCCACACTTCTCCAAGCCTTACTACCAAGTCATTGTACAGGAGAACAACAC TCCTGGTGCCTATCTGCTCTCAGTGTCTGCCCGCGACCCTGACATGGGTCTTAATGGCAGTGTCTCCTAT CAAATTGTGCCATCACAGGTGCGAGACATGCCAGTCTTCACCTATGTCTCAATCAATCCCAACTCTGGTG ACATCTATGCGCTCCGTTCCTTTAACCATGAGCAGACCAAGGCGTTTGAATTCAAGGTCCTGGCCAAGGA TGGCGGCTTGCCCTCCCTGCAAAGCAATGCCACTGTGAGGGTCATTATCCTCGACGTCAATGACAATACA CCGGTCATCACTGCCCCACCTCTGATCAATGGCACTGCTGAGGTCTACATTCCTCGAAACTCTGGCATAG GCTATTTGGTGACTGTAGTTAAGGCAGACGATTATGATGAGGGCGAAAATGGCCGAGTCACCTATGACAT GACAGAAGGTGACCGAGGTTTCTTCGAAATAGACCAGGTCAATGGAGAAGTCAGAACCACTCGTACCTTT AATGAGAACTCCAAGCCTTCCTATGAGCTTATAGTGGTGGCCCATGACCATGGCAAGACATCTCTCTCTG CTTCTGCCCTTGTCCTAATATACCTGTCCCCAGCTCTTGATGCCCAAGAGTCAATGGGCTCTGTGAACTT ATCCCTGATTTTCATTATTGCTCTGGGCTCCATTGCGGGCATTCTCTTTGTCACTATGATCTTCGTGGCA ATCAAATGCAAGCGTGACAACAAAGAGATCCGGACCTACAATTGCAGAATCGCTGAGTACTCCTATGGGC ATCAAAAGAAATCAAGTAAGAAGAAAAAAATTAGTAAGAATGACATCCGCCTTGTACCTCGGGACGTGGA GGAGACAGACAAGATGAATGTTGTCAGTTGCTCCTCCCTTACTTCGTCCCTCAACTATTTCGACTACCAC CAGCAGACACTGCCCCTGGGCTGTCGTCGCTCTGAGAGCACTTTCCTGAATGTGGAGAACCAGAATACCC GTAACACCACTGCCAGCCACATCTACCATCACTCCTTCAACAGCCAGGGCCCACAGCAGCCAGACCTGAT CATCAATGGTGTGCCCCTGCCTGAGACTGAAAACTATTCTTTTGACTCTAACTACGTGAATAGCCGTGCC CATTTAATCAAAAGCTCCACCTTCAAGGACCTAGAGGGCAACAGCCTGAAGGATAGTGGGCATGAGGAGA GTGACCAGACTGACAGTGAGCATGATGTCCAGAGGAGCCTGTACTGCGATACTGCTGTGAATGATGTCCT GAACACCAGTGTGACTTCCATGGGATCTCAGATGCCTGACCATGACCAGAATGAAGGATTTCATTGCAGG GAAGAATGCCGGATTCTTGGCCACTCTGATAGATGCTGGATGCCTCGGAATCCCATGCCCACCCGCTCCA AGTCACCTGAGCACGTGAGGAACATCATCGCTCTGTCCATTGAAGCTACTGCTGCTGATGTTGAGGCTTA TGACGACTGCGGCCCCACCAAGCGGACTTTCGCGACCTTTGGAAAAGATGTCAGTAGCCACCGGGCTGAG GAGCGTCCCATCCTGAAAGGCAAGCGGACTGTCGATGTGACCATCTGCAGCCCCAAAGTCAACAGCGCTA TCCGGGAGGCAGGCAATGGGTGTGAAGCTATTAGCCCTGTCACCTCCCCACTCCACCTGAAGAGCCCTCT GCCCACCAAGCCTTCTATATCTTACACCGTCGCCCTGGCTCCTCCAGCTCACGATCTGGAGCACCATGCC AACAGTGGCGCCTCTCGTCCTTCTGAGGCTGAGCCCCGTGGAGCCGACAACGAGAAAGTGATGCATGAGG TCAACCCTATTCGGAAGGATGGTCGTGACAAGGAATCTCCTAGCGTGAAGCGTCTGAAGGATATCGTTCT CTAA
Translation (1097 aa): MESLLLPVLLLLAVLWTQAAALINLKYSVEEEQRAGTVIANVAKDAREAGFALDPRQASAFRVVSNSAPH LVDINPSSGLLVTKQKIDRDLLCRQSPKCIISLEVMSSSMEICVIKVEIKDLNDNAPSFPAAQIELEISE AASPGTRIPLDSAYDPDSGSFGVQTYELTPNELFGLEIKTRGDGSRFAELVVEKSLDRETQSHYSFRITA LDGGDPPHMGTVGLSIKVTDSNDNNPVFGESTYSVSVPENSPPNTPVIRLNASDPDEGTNGQVVYSFYGY VNDRTRELFQIDPHSGLVTVTGALDYEEGHVYELDVQAKDLGPNSIPAHCKVTVSVLDTNDNPPIINLLS VNSELVEVSESAPPGYVIALVRVSDRDSGLNGRVQCRLLGNVPFRLQEYESFSTILVDGRLDREQHDQYN LTIQARDSGVPMLQSAKSFTVRITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDMGLNGSVSY QIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGLPSLQSNATVRVIILDVNDNT PVITAPPLINGTAEVYIPRNSGIGYLVTVVKADDYDEGENGRVTYDMTEGDRGFFEIDQVNGEVRTTRTF NENSKPSYELIVVAHDHGKTSLSASALVLIYLSPALDAQESMGSVNLSLIFIIALGSIAGILFVTMIFVA IKCKRDNKEIRTYNCRIAEYSYGHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYH QQTLPLGCRRSESTFLNVENQNTRNTTASHIYHHSFNSQGPQQPDLIINGVPLPETENYSFDSNYVNSRA HLIKSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRSLYCDTAVNDVLNTSVTSMGSQMPDHDQNEGFHCR EECRILGHSDRCWMPRNPMPTRSKSPEHVRNIIALSIEATAADVEAYDDCGPTKRTFATFGKDVSSHRAE ERPILKGKRTVDVTICSPKVNSAIREAGNGCEAISPVTSPLHLKSPLPTKPSISYTVALAPPAHDLEHHA NSGASRPSEAEPRGADNEKVMHEVNPIRKDGRDKESPSVKRLKDIVL
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