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Report for CCDS46582.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46582.1 Public Homo sapiens 20 DZANK1 24 110 108 CCDS HistoryNCBI Gene:55184Re-query CCDS DB by CCDS ID:46582.1Re-query CCDS DB by GeneID:55184See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 46582.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000262547.9 ENSP00000262547.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000262547.9Link to Ensembl Protein Viewer:ENSP00000262547.5Re-query CCDS DB by Nucleotide ID:ENST00000262547Re-query CCDS DB by Protein ID:ENSP00000262547
Original member Current member EBI ENST00000358866.10 ENSP00000351734.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000358866.10Link to Ensembl Protein Viewer:ENSP00000351734.6Re-query CCDS DB by Nucleotide ID:ENST00000358866Re-query CCDS DB by Protein ID:ENSP00000351734
Original member Current member NCBI NM_001099407.2 NP_001092877.1 Accepted alive Link to Nucleotide Sequence:NM_001099407.2Link to Protein Sequence:NP_001092877.1Re-query CCDS DB by Nucleotide ID:NM_001099407Re-query CCDS DB by Protein ID:NP_001092877Link to BLAST:NP_001092877.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001092877.1 752 Q9NVP4-1 752 100% 0 0

Chromosomal Locations for CCDS 46582.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 18384399 18384564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18385016 18385090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18389701 18389828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18390379 18390459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18393711 18393811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18394254 18394350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18396472 18396546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18398523 18398626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18412646 18412835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18414348 18414512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18415327 18415449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18427067 18427159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18433652 18433765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18443347 18443464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18448984 18449069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18452615 18452682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18453731 18453827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18455247 18455361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18460153 18460306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18465250 18465358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2259 nt):
ATGACTGCTGGTTCAGTGTGTGTCCCTCAGATCATACCATTACGAGTGCCTCAGCCTGGAAAAGCTAACC
ATGAAATTGATAACAATACGCTTTTGGAAATGAAATCAGACACTCCAGATGTCAACATATATTATACTCT
GGATGGCAGCAAACCTGAATTTCTAAAGAGAATTGGTTATGGGGAAAATAACACATTTAAGTATATAAAA
CCTATTACTCTGCCTGATGGAAAAATACAAGTTAAAGCTATTGCTGTCTCTAAAGACTGCAGACAGAGTG
GCATTGTGACAAAGGTGTTTCACGTAGACTATGAACCACCAAATATAGTCTCTCCTGAAGACAATGTTGA
AAATGTTCTCAAAGATTCTTCAAGGCAGGAATTCAAAAATGGATTTGTTGGATCAAAACTAAAGAAAAAA
TATAAGAACTCTGAAAATCAACGCAGCTGGAATGTTAACCTTAGAAAGTTTCCAGAGAGTCCATTGGAAA
TCCCAGCTTATGGTGGAGGATCAGGTTCTAGACCACCCACCCGCCAGTCCCAGTCCCCCGGTTTTGCACA
CGTAAGCGGTCAGAAGTGTTTGACAAGCACGGAGATAATGAGAATTCAAAGGGAGACAGACTTTCTCAAG
TGTGCCCACTGCCTTGCCCCCCGGCCATCAGATCCCTTTGCTCGCTTCTGTCAAGAATGTGGCTCTCCTG
TCCCACCCATATTTGGCTGTCGTCTCCCACCCCCAGAAGGAGCTCAGATGGGCTTGTGTGCAGAATGCAG
AAGCTTGGTACCCATGAACACTCCCATCTGTGTGGTGTGTGAGGCCCCTCTTGCTCTACAGCTGCAGCCA
CAGGCAAGCCTCCACTTGAAGGAGAAGGTAATTTGCCGGGCCTGTGGTACAGGAAATCCTGCTCACCTGA
GATACTGTGTCACCTGTGAGGGGGCCCTGCCTTCATCACAAGAGTCGATGTGCAGTGGGGATAAAGCCCC
TCCTCCGCCCACTCAGAAAGGGGGGACCATTTCCTGCTACAGATGTGGTCGCTGGAATCTCTGGGAGGCG
TCCTTCTGCGGCTGGTGTGGAGCCATGCTCGGCATTCCTGCTGGCTGTTCTGTTTGCCCTAAATGTGGGG
CCAGCAATCACCTGTCTGCCCGATTCTGTGGCTCCTGTGGTATTTGTGTGAAGTCCCTAGTGAAACTTAG
CTTGGACAGAAGCCTGGCTCTAGCTGCTGAGGAACCTCGCCCTTTTTCTGAGTCCCTGAATATTCCTTTG
CCCAGATCTGATGTTGGGACTAAGAGGGACATAGGAACACAGACTGTTGGCCTCTTCTACCCATCTGGCA
AGCTGCTAGCAAAAAAGGAACAGGAACTAGCCTCTCAAAAGCAGAGGCAGGAGAAAATGAGTGACCATAA
ACCCCTCCTGACAGCCATCAGCCCAGGAAGAGGGTACTGGAGAAGACAGCTGGATCACATCTCTGCTCAC
CTCAGGTGTTATGCTCAGAACAACCCTGAATTCCGGGCCTTGATTGCAGAACCCAGGATGGGAAAGCTTA
TCTCTGCTACTGTCCACGAAGATGGTTGTGAAGTTAGCATCAGACTGAATTATAGTCAAGTCTCAAACAA
GAACCTTTACCTGAACAAGGCAGTGAATTTCAGCGATCACCTTCTGAGCAGTGCTGCCGAGGGTGATGGG
GGGCTGTGCGGCAGCAGGTCCAGCTGGGTGAGTGACTACAGCCAGAGTACCTCAGATACTATTGAAAAAA
TCAAAAGGATAAAGAATTTCAAGACCAAAACTTTTCAAGAAAAGAAGGAGCAGCTTATACCTGAAAACAG
ACTCCTGCTGAAGGAAGTCGGACCCACGGGGGAAGGAAGAGTCTCTGTGATTGAACAGCTGCTGGATGAG
GGAGCAGACCCCAACTGCTGTGATGAAGACAATCGACCCGTCATAACCGTGGCTGTTATGAATAAGCACC
ATGAAGCGATTCCAGTTCTCGTGCAGAGAGGAGCAGACATCGACCAGCAGTGGGGGCCGCTCAGAAATAC
AGCTCTTCATGAAGCAACTCTGCTTGGCCTTGCAGGAAGAGAGAGCACCGCCACTTTACTGGGATGCAAT
GCAAGCATCCAAAAGAAGAATGCAGGAGGCCAGACAGCATACGACCTGGCTCTGAACACTGGAGATGACC
TTGTCACCTCACTCTTTGCTGCCAAGTTTGGCCAAGGGCTTGAGGACCAACTCGCTCAAACTAGGAGCCT
CAGCCTGGATGACTGTTAG

Translation (752 aa):
MTAGSVCVPQIIPLRVPQPGKANHEIDNNTLLEMKSDTPDVNIYYTLDGSKPEFLKRIGYGENNTFKYIK
PITLPDGKIQVKAIAVSKDCRQSGIVTKVFHVDYEPPNIVSPEDNVENVLKDSSRQEFKNGFVGSKLKKK
YKNSENQRSWNVNLRKFPESPLEIPAYGGGSGSRPPTRQSQSPGFAHVSGQKCLTSTEIMRIQRETDFLK
CAHCLAPRPSDPFARFCQECGSPVPPIFGCRLPPPEGAQMGLCAECRSLVPMNTPICVVCEAPLALQLQP
QASLHLKEKVICRACGTGNPAHLRYCVTCEGALPSSQESMCSGDKAPPPPTQKGGTISCYRCGRWNLWEA
SFCGWCGAMLGIPAGCSVCPKCGASNHLSARFCGSCGICVKSLVKLSLDRSLALAAEEPRPFSESLNIPL
PRSDVGTKRDIGTQTVGLFYPSGKLLAKKEQELASQKQRQEKMSDHKPLLTAISPGRGYWRRQLDHISAH
LRCYAQNNPEFRALIAEPRMGKLISATVHEDGCEVSIRLNYSQVSNKNLYLNKAVNFSDHLLSSAAEGDG
GLCGSRSSWVSDYSQSTSDTIEKIKRIKNFKTKTFQEKKEQLIPENRLLLKEVGPTGEGRVSVIEQLLDE
GADPNCCDEDNRPVITVAVMNKHHEAIPVLVQRGADIDQQWGPLRNTALHEATLLGLAGRESTATLLGCN
ASIQKKNAGGQTAYDLALNTGDDLVTSLFAAKFGQGLEDQLAQTRSLSLDDC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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