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Report for CCDS4631.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4631.1 Public Homo sapiens 6 HIST1H4K 22 109 92 CCDS HistoryNCBI Gene:8362Re-query CCDS DB by CCDS ID:4631.1Re-query CCDS DB by GeneID:8362See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4631.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI,WTSI ENST00000611927.1 ENSP00000479794.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000611927.1Link to Ensembl Protein Viewer:ENSP00000479794.1Re-query CCDS DB by Nucleotide ID:ENST00000611927Re-query CCDS DB by Protein ID:ENSP00000479794
Original member Current member NCBI NM_003541.2 NP_003532.1 Accepted alive Link to Nucleotide Sequence:NM_003541.2Link to Protein Sequence:NP_003532.1Re-query CCDS DB by Nucleotide ID:NM_003541Re-query CCDS DB by Protein ID:NP_003532Link to BLAST:NP_003532.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003532.1 103 P62805 103 100% 0 0

Chromosomal Locations for CCDS 4631.1

Assembly GRCh38.p12 (GCF_000001405.38)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 27831216 27831527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (312 nt):
ATGTCTGGCCGCGGCAAAGGCGGGAAGGGTCTTGGCAAAGGCGGCGCTAAGCGCCACCGTAAAGTACTGC
GC
GACAATATCCAGGGCATCACCAAGCCGGCCATCCGGCGCCTTGCTCGCCGCGGCGGCGTGAAGCGCAT
C
TCCGGCCTCATCTACGAGGAGACTCGCGGGGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGGGACGCC
GTG
ACCTATACAGAGCACGCCAAGCGCAAGACGGTCACCGCCATGGATGTGGTCTACGCGCTCAAGCGCC
AG
GGCCGCACCCTCTACGGTTTCGGTGGTTGA


Translation (103 aa):
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDA
V
TYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser