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Report for CCDS44731.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44731.1 Public Homo sapiens 11 IL18 24 110 108 CCDS HistoryNCBI Gene:3606Re-query CCDS DB by CCDS ID:44731.1Re-query CCDS DB by GeneID:3606See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44731.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000280357.12 ENSP00000280357.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000280357.12Link to Ensembl Protein Viewer:ENSP00000280357.7Re-query CCDS DB by Nucleotide ID:ENST00000280357Re-query CCDS DB by Protein ID:ENSP00000280357
Original member Current member EBI ENST00000528832.1 ENSP00000434161.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000528832.1Link to Ensembl Protein Viewer:ENSP00000434161.1Re-query CCDS DB by Nucleotide ID:ENST00000528832Re-query CCDS DB by Protein ID:ENSP00000434161
Original member Current member NCBI NM_001386420.1 NP_001373349.1 Accepted alive Link to Nucleotide Sequence:NM_001386420.1Link to Protein Sequence:NP_001373349.1Re-query CCDS DB by Nucleotide ID:NM_001386420Re-query CCDS DB by Protein ID:NP_001373349Link to BLAST:NP_001373349.1
Original member Current member NCBI NM_001562.4 NP_001553.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001562.4Link to Protein Sequence:NP_001553.1Re-query CCDS DB by Nucleotide ID:NM_001562Re-query CCDS DB by Protein ID:NP_001553Link to BLAST:NP_001553.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001373349.1 193 Q14116-1 193 100% 0 0
NP_001553.1 193 Q14116-1 193 100% 0 0

Chromosomal Locations for CCDS 44731.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 112143596 112143817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112148603 112148736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112150072 112150206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112153592 112153603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112154975 112155053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (582 nt):
ATGGCTGCTGAACCAGTAGAAGACAATTGCATCAACTTTGTGGCAATGAAATTTATTGACAATACGCTTT
ACTTTATAGCTGAAGATGATGAAAACCTGGAATCAGATTACTTTGGCAAGCTTGAATCTAAATTATCAGT
CATAAGAAATTTGAATGACCAAGTTCTCTTCATTGACCAAGGAAATCGGCCTCTATTTGAAGATATGACT
GATTCTGACTGTAGAGATAATGCACCCCGGACCATATTTATTATAAGTATGTATAAAGATAGCCAGCCTA
GAGGTATGGCTGTAACTATCTCTGTGAAGTGTGAGAAAATTTCAACTCTCTCCTGTGAGAACAAAATTAT
TTCCTTTAAGGAAATGAATCCTCCTGATAACATCAAGGATACAAAAAGTGACATCATATTCTTTCAGAGA
AGTGTCCCAGGACATGATAATAAGATGCAATTTGAATCTTCATCATACGAAGGATACTTTCTAGCTTGTG
AAAAAGAGAGAGACCTTTTTAAACTCATTTTGAAAAAAGAGGATGAATTGGGGGATAGATCTATAATGTT
CACTGTTCAAAACGAAGACTAG

Translation (193 aa):
MAAEPVEDNCINFVAMKFIDNTLYFIAEDDENLESDYFGKLESKLSVIRNLNDQVLFIDQGNRPLFEDMT
DSDCRDNAPRTIFIISMYKDSQPRGMAVTISVKCEKISTLSCENKIISFKEMNPPDNIKDTKSDIIFFQR
SVPGHDNKMQFESSSYEGYFLACEKERDLFKLILKKEDELGDRSIMFTVQNED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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