CCDS Report for Consensus CDS

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Report for CCDS42834.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
42834.1	Public	Homo sapiens	2	DIS3L2	24	110	108

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42834.1

Original	Current	Source	Nucleotide ID	Protein ID	MANE	Status in CCDS	Seq. Status	Links
		EBI	ENST00000325385.12	ENSP00000315569.7	MANE Select	Accepted	alive
		NCBI	NM_152383.5	NP_689596.4	MANE Select	Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_689596.4	885	Q8IYB7-1	885	100%	0	0

Chromosomal Locations for CCDS 42834.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)

Genome Browser links:

Chromosome	Start	Stop
2	232014928	232014979
2	232015514	232015671
2	232024277	232024330
2	232029979	232030080
2	232087487	232087721
2	232130619	232130719
2	232136472	232136719
2	232163459	232163632
2	232210326	232210405
2	232238533	232238645
2	232249239	232249346
2	232263207	232263440
2	232300040	232300119
2	232329813	232329996
2	232330690	232330776
2	232333840	232333987
2	232334369	232334499
2	232334631	232334735
2	232335773	232335874
2	232336469	232336630

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2658 nt):
ATGAGCCATCCTGACTACAGAATGAACCTCCGGCCCCTGGGGACCCCCAGAGGTGTGTCTGCTGTGGCTG GTCCACATGACATTGGTGCTTCGCCAGGTGACAAAAAGTCAAAGAACAGGTCCACACGAGGGAAGAAAAA GAGCATATTTGAAACTTACATGTCCAAGGAGGATGTTTCAGAAGGCTTGAAGAGAGGAACACTCATCCAG GGTGTATTGAGAATTAATCCAAAGAAGTTTCATGAAGCCTTCATTCCTTCCCCGGATGGTGATCGAGACA TTTTTATTGATGGGGTTGTTGCTCGTAATAGAGCCTTAAATGGGGATCTGGTGGTCGTGAAACTGCTTCC CGAGGAGCATTGGAAGGTAGTTAAACCAGAGAGCAATGACAAAGAAACAGAAGCTGCGTATGAATCAGAT ATCCCCGAGGAGCTCTGTGGACACCATCTCCCGCAACAGTCCCTGAAAAGCTATAATGACAGTCCTGATG TCATTGTAGAGGCTCAGTTTGATGGCAGCGACTCAGAAGATGGACATGGCATCACACAAAATGTGCTGGT TGATGGTGTTAAGAAACTCTCAGTTTGTGTTTCTGAGAAAGGAAGAGAGGATGGTGATGCACCGGTTACA AAAGATGAGACCACCTGCATTTCACAAGACACAAGAGCTTTATCGGAGAAATCCCTGCAAAGATCAGCAA AGGTGGTTTACATCTTGGAGAAAAAACATTCTCGAGCAGCAACCGGCTTCCTCAAACTCTTGGCTGATAA GAACAGCGAACTGTTTAGGAAATACGCCCTGTTTTCTCCCTCAGACCACCGAGTGCCTAGAATTTATGTG CCTCTCAAGGACTGTCCCCAGGACTTTGTGGCACGGCCTAAAGATTATGCCAACACACTGTTCATCTGCC GCATTGTGGACTGGAAGGAGGACTGCAATTTTGCCCTGGGGCAGCTGGCTAAGAGTCTTGGGCAGGCTGG TGAAATTGAGCCTGAAACAGAAGGAATACTAACAGAGTATGGCGTGGATTTCTCTGATTTCTCTTCAGAA GTTCTAGAATGTCTTCCTCAAGGCCTGCCATGGACAATTCCACCAGAGGAGTTCAGCAAGAGAAGGGATT TAAGAAAAGACTGTATCTTCACCATTGACCCATCAACCGCCCGAGACCTCGATGATGCCCTCTCCTGCAA GCCACTCGCTGACGGCAACTTCAAAGTGGGAGTTCACATTGCTGACGTGAGTTACTTTGTTCCGGAGGGA TCTGATCTGGATAAAGTGGCTGCCGAGAGGGCTACAAGCGTCTACTTGGTTCAAAAGGTGGTCCCCATGC TTCCCAGGCTGCTGTGTGAGGAGCTGTGCAGCCTCAACCCCATGTCCGACAAGCTGACCTTCTCTGTGAT CTGGACACTGACTCCAGAGGGCAAGATCCTTGATGAATGGTTTGGCCGGACCATCATCCGCTCCTGCACC AAACTTAGCTACGAGCATGCACAGAGCATGATTGAAAGCCCAACTGAGAAAATCCCTGCGAAAGAGCTGC CCCCCATTTCCCCAGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGCCAA GCAGTTACGCCAGCAGCGCTTTGTGGACGGCGCACTTCGTTTGGATCAGCTAAAGCTTGCTTTCACTCTG GACCACGAGACCGGATTGCCTCAAGGATGTCATATCTATGAGTACCGCGAGAGCAACAAGCTCGTGGAGG AGTTCATGCTCTTGGCCAACATGGCAGTGGCCCACAAGATCCACCGCGCCTTCCCCGAGCAGGCCCTGCT GCGCCGGCACCCCCCGCCCCAAACAAGGATGCTCAGTGACCTGGTGGAATTCTGCGACCAGATGGGGCTG CCCGTGGACTTCAGCTCCGCAGGAGCCCTCAATAAAAGCCTGACCCAAACATTTGGAGATGACAAGTACT CACTGGCCCGCAAGGAGGTGCTCACCAACATGTGCTCCCGGCCCATGCAGATGGCACTGTACTTCTGCTC GGGGCTGCTGCAGGACCCAGCGCAGTTCCGGCACTACGCGCTCAATGTGCCCCTGTACACACACTTCACC TCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGC GACTAGACATGGCGCCCGATACCCTGCAGAAACAGGCGGACCACTGTAACGACCGCCGCATGGCGTCCAA GCGCGTGCAGGAGCTCAGTACCAGTCTCTTCTTTGCTGTTCTGGTCAAGGAGAGTGGCCCCCTGGAGTCA GAAGCCATGGTGATGGGCATCCTGAAGCAAGCCTTCGACGTGCTGGTGCTGCGCTACGGCGTGCAGAAGC GCATCTACTGCAACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCAC GCTGGTCTGGGAGCCTGAGGACATGGAGCAGGAGCCAGCACAGCAGGTCATCACCATCTTCAGCCTGGTG GAGGTGGTCCTGCAGGCAGAGTCCACAGCCCTCAAGTACAGCGCCATCCTGAAGCGGCCAGGCACCCAGG GCCACCTGGGCCCTGAGAAGGAGGAGGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGA
Translation (885 aa):
MSHPDYRMNLRPLGTPRGVSAVAGPHDIGASPGDKKSKNRSTRGKKKSIFETYMSKEDVSEGLKRGTLIQ GVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNGDLVVVKLLPEEHWKVVKPESNDKETEAAYESD IPEELCGHHLPQQSLKSYNDSPDVIVEAQFDGSDSEDGHGITQNVLVDGVKKLSVCVSEKGREDGDAPVT KDETTCISQDTRALSEKSLQRSAKVVYILEKKHSRAATGFLKLLADKNSELFRKYALFSPSDHRVPRIYV PLKDCPQDFVARPKDYANTLFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSE VLECLPQGLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFKVGVHIADVSYFVPEG SDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWTLTPEGKILDEWFGRTIIRSCT KLSYEHAQSMIESPTEKIPAKELPPISPEHSSEEVHQAVLNLHGIAKQLRQQRFVDGALRLDQLKLAFTL DHETGLPQGCHIYEYRESNKLVEEFMLLANMAVAHKIHRAFPEQALLRRHPPPQTRMLSDLVEFCDQMGL PVDFSSAGALNKSLTQTFGDDKYSLARKEVLTNMCSRPMQMALYFCSGLLQDPAQFRHYALNVPLYTHFT SPIRRFADVLVHRLLAAALGYRERLDMAPDTLQKQADHCNDRRMASKRVQELSTSLFFAVLVKESGPLES EAMVMGILKQAFDVLVLRYGVQKRIYCNALALRSHHFQKVGKKPELTLVWEPEDMEQEPAQQVITIFSLV EVVLQAESTALKYSAILKRPGTQGHLGPEKEEEESDGEPEDSSTS

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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