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Report for CCDS40882.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40882.1 Public Mus musculus X Maob 23 108 98 CCDS HistoryNCBI Gene:109731Re-query CCDS DB by CCDS ID:40882.1Re-query CCDS DB by GeneID:109731See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40882.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000040820.12 ENSMUSP00000040550.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000040820.12Link to Ensembl Protein Viewer:ENSMUSP00000040550.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000040820Re-query CCDS DB by Protein ID:ENSMUSP00000040550
Original member Current member NCBI NM_172778.2 NP_766366.2 Accepted alive Link to Nucleotide Sequence:NM_172778.2Link to Protein Sequence:NP_766366.2Re-query CCDS DB by Nucleotide ID:NM_172778Re-query CCDS DB by Protein ID:NP_766366Link to BLAST:NP_766366.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766366.2 520 Q8BW75 520 100% 0 0

Chromosomal Locations for CCDS 40882.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 16710039 16710191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16711248 16711310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16712566 16712677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16716386 16716483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16718256 16718313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16722936 16722989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16724660 16724756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16732019 16732178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16734074 16734223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16735972 16736113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16739094 16739185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16740071 16740175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16768378 16768515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16770925 16771019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16817230 16817275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1563 nt):
ATGAGCAACAAAAGCGATGTGATCGTGGTGGGGGGCGGCATCTCAGGTATGGCGGCAGCCAAACTTCTGC
AT
GATTGTGGCCTCAGTGTGGTGGTTCTGGAAGCACGGGACCGTGTAGGAGGCAGGACTTACACAATTAG
G
AATAAAAACGTTAAATATGTGGACCTTGGAGGATCTTATGTTGGGCCAACCCAGAATCGTATCTTACGA
TTG
GCCAAAGAGCTAGGATTGGAGACCTATAAAGTTAATGAAGTTGAGCGGCTGATACACTTTGTAAAGG
GA
AAATCATATGCCTTCAGGGGCCCATTTCCACCAGTATGGAATCCTATCACCTACCTAGATAATAACAA
C
CTCTGGAGGACAATGGATGAGATGGGCCAAGAGATTCCCAGTGATGCTCCATGGAAAGCACCCCTTGCT
GAA
GAGTGGGACTACATGACAATGAAAGAATTGCTAGATAAGATCTGCTGGACCAAATCTACAAAGCAGA
TT
GCCACGCTCTTTGTGAACCTGTGTGTAACTGCAGAGACCCATGAGGTCTCTGCACTATGGTTCCTGTG
G
TATGTGAAGCAGTGTGGAGGTACAACCAGAATCATCTCAACAACCAATGGAGGACAGGAGAGGAAATTT
ATT
GGTGGATCTGGTCAAGTGAGTGAACGGATAAAGGATATACTTGGGGACCGAGTGAAGCTGGAGAGGC
CT
GTGATCCACATTGACCAGACAGGGGAAAATGTTATTGTGAAAACCCTAAACCATGAAATATATGAGGC
T
AAATATGTGATTAGTGCCATTCCACCTGCTTTGGGCATGAAGATTCACTATAGTCCTCCTCTGCCCATG
CTA
AGAAACCAGCTGATCTCTCGTGTGCCTTTGGGTTCAGTTATTAAATGCATGGTTTATTACAAAGAGC
CC
TTCTGGAGGAAAAAGGATTTCTGTGGAACCATGGTTATCGAAGGAGAGGAAGCTCCAATTGCATACAC
A
TTGGATGATACCAAACCAGATGGCACCTATGCTGCTATAATGGGATTTATCCTTGCTCACAAAGCTAGA
AAA
CTGGTACGTCTCACCAAAGAAGAAAGACTGAGGAAACTTTGTGAGCTATATGCAAAAGTGCTGAACT
CC
CAAGAAGCTCTGCAGCCCGTCCATTATGAAGAGAAGAACTGGTGTGAGGAACAGTATTCTGGGGGCTG
C
TACACAACCTACTTCCCTCCCGGCATCTTGACCCAGTATGGAAGGGTTCTACGTCAGCCAGTGGGCAAG
ATT
TTCTTTGCAGGCACTGAAACAGCCTCACACTGGAGCGGCTACATGGAGGGGGCTGTGGAGGCTGGGG
AG
AGAGCAGCCAGAGAGATTCTTCATGCCATTGGGAAGATTCCAGAAGATGAAATTTGGCAGCCAGAACC
A
GAATCTTTGGATGTCCCTGCACGACCCATTACCAGTACCTTCCTGGAGAGACACCTGCCTTCTGTACCA
GGC
CTGCTAAAGCTGTTTGGATTGACCACCATCTTGTCAGCAACAGCTCTTGGTTTCCTGGCCCACAAAA
GG
GGCCTGTTTGTACATTTTTAA


Translation (520 aa):
MSNKSDVIVVGGGISGMAAAKLLHDCGLSVVVLEARDRVGGRTYTIRNKNVKYVDLGGSYVGPTQNRILR
L
AKELGLETYKVNEVERLIHFVK
GKSYAFRGPFPPVWNPITYLDNNNLWRTMDEMGQEIPSDAPWKAPLA
E
EWDYMTMKELLDKICWT
KSTKQIATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKF
I
GGSGQVSERIKDILGDRVKLERPVIHIDQTGENVIVKTLNHEIYE
AKYVISAIPPALGMKIHYSPPLPM
L
RNQLISRVPLGSVIKCMVYYKEPFWRKK
DFCGTMVIEGEEAPIAYTLDDTKPDGTYAAIMGFILAHKAR
K
LVRLTKEE
RLRKLCELYAKVLNSQEALQPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVGK
I
FFAGTETASHWSGYMEGAVEAGERAARE
ILHAIGKIPEDEIWQPEPESLDVPARPITSTFLERHLPSVP
G
LLKLFGLTTILSATALGFLAHKRGLFVHF




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser