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Report for CCDS3825.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3825.1 Public Homo sapiens 4 WDR17 24 110 108 CCDS HistoryNCBI Gene:116966Re-query CCDS DB by CCDS ID:3825.1Re-query CCDS DB by GeneID:116966See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3825.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000280190.8 ENSP00000280190.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000280190.8Link to Ensembl Protein Viewer:ENSP00000280190.4Re-query CCDS DB by Nucleotide ID:ENST00000280190Re-query CCDS DB by Protein ID:ENSP00000280190
Original member Current member NCBI NM_170710.5 NP_733828.2 Accepted alive Link to Nucleotide Sequence:NM_170710.5Link to Protein Sequence:NP_733828.2Re-query CCDS DB by Nucleotide ID:NM_170710Re-query CCDS DB by Protein ID:NP_733828Link to BLAST:NP_733828.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_733828.2 1322 Q8IZU2-1 1322 100% 0 0

Chromosomal Locations for CCDS 3825.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 176096520 176096585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176111575 176111703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176115796 176115979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176119867 176120097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176125104 176125355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176128738 176128860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176131554 176131738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176135108 176135276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176137520 176137611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176139892 176139974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176141983 176142069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176145995 176146159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176148133 176148335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176149807 176149956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176150043 176150173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176150468 176150593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176151812 176151967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176156079 176156143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176159994 176160126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176160911 176161002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176162075 176162174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176163154 176163293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176166124 176166144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176168648 176168783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176172375 176172516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176173267 176173369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176174617 176174718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176177058 176177156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176177471 176177654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 176179460 176179579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3969 nt):
ATGGCTTGGATGACTTACATTTCAAATTGGTTTGAGCAAGATGATTGGTATGAAGGACTACAAAGAGCAA
AC
ATGTCCCAGGTAAGGCAAGTGGGATTGCTGGCTGCTGGATGTCAGCCATGGAACAAGGATGTATGTGC
T
GCCAGTGGAGACAGGTTTGCATATTGTGCGACCCTGGCTATCTATATTTATCAGTTGGATCACCGTTAT
AAT
GAATTCAAACTTCACGCAATTATGTCTGAACATAAAAAAACAATCACAGCAATTTCTTGGTGTCCAC
AT
AATCCTGATCTGTTTGCAAGTGGCAGTACTGATAATTTAGTGATCATTTGGAATGTTGCAGAACAAAA
A
GTCATTGCTAAACTCGACAGTACAAAAGGGATCCCTGCTTCTCTTAGTTGGTGCTGGAATGCAGAGGAT
GTG
GTGGCATTTGTTTCCCACAGAGGCCCACTGTTCATTTGGACCATCTCAGGACCAGATAGTGGAGTGA
TT
GTACACAAAGATGCTCATAGCTTCTTGTCTGATATCTGTATGTTCAGATGGCATACACACCAAAAGGG
G
AAAGTTGTGTTTGGTCATATTGATGGAAGTCTATCAATTTTTCATCCAGGTAATAAAAATCAGAAACAT
GTT
TTGAGACCAGAATCTCTTGAAGGGACAGATGAAGAGGATCCAGTTACGGCCTTGGAATGGGACCCAC
TA
TCTACTGATTATCTTCTAGTGGTTAATTTGCATTATGGAATTCGCCTGGTAGATTCTGAATCACTTTC
T
TGCATAACAACATTTAATCTTCCCAGTGCAGCAGCTTCTGTACAGTGCTTAGCCTGGGTTCCCAGTGCT
CCT
GGGATGTTTATAACTGGAGATTCTCAAGTGGGTGTTTTACGCATTTGGAATGTTTCAAGAACAACAC
CT
ATTGATAATCTTAAATTAAAGAAAACAGGATTTCACTGCTTACATGTACTTAATTCTCCTCCAAGAAA
A
AAGTTTTCAGTCCAATCTCCAACCAAAAATCATTATACATCCTCAACAAGCGAAGCAGTTCCACCCCCA
ACT
TTAACACAGAATCAAGCATTTTCTCTTCCTCCTGGTCATGCAGTGTGTTGTTTCTTGGATGGTGGAG
TT
GGACTTTATGATATGGGAGCTAAGAAGTGGGATTTTCTTAGAGACTTGGGACATGTGGAAACTATCTT
T
GACTGCAAATTCAAACCTGACGATCCTAATCTTTTAGCAACAGCTTCATTTGATGGCACTATAAAAGTC
TGG
GATATAAACACATTAACAGCAGTGTACACATCCCCGGGTAATGAAGGTGTTATTTATTCCCTTTCTT
GG
GCTCCAGGTGGTTTAAATTGTATTGCTGGGGGAACTTCCCGAAATGGTGCTTTTATTTGGAATGTTCA
A
AAGGGCAAAATTATACAACGATTTAATGAGCATGGAACAAATGGAATATTCTGCATTGCCTGGAGTCAT
AAA
GATTCTAAAAGAATAGCAACCTGCAGCAGTGATGGTTTCTGTATTATTCGAACAATTGATGGTAAAG
TG
CTACACAAATATAAACATCCAGCTGCAGTGTTTGGTTGTGATTGGAGCCAAAACAATAAAGACATGAT
A
GCCACTGGCTGTGAAGACACAAATGTTCGTGTTTATTATGTAGCCACCAGCTCAGATCAACCATTGAAA
GTA
TTTAGTGGGCATACAGCAAAAGTGTTTCATGTTAAATGGTCTCCTCTGAGAGAGGGAATTCTTTGCA
GT
GGTTCTGATGATGGTACCGTTCGAATCTGGGATTATACTCAGGATGCTTGCATCAATATTCTTAATGG
A
CACACTGCACCTGTGAGAGGATTAATGTGGAATACTGAGATTCCATATCTGCTCATATCTGGCAGCTGG
GAC
TATACTATAAAAGTATGGGACACTCGAGAAGGAACTTGTGTGGATACTGTGTATGATCACGGTGCAG
AT
GTATATGGTTTAACCTGCCATCCCAGTCGCCCCTTCACTATGGCCTCTTGCTCCCGTGACTCTACAGT
G
AGACTCTGGTCATTAACAGCCTTAGTCACTCCTGTACAAATAAATATTCTGGCAGACAGATCTTGGGAA
GAA
ATTATTGGGAACACTGATTATGCTATAGAACCAGGCACTCCTCCTCTACTGTGTGGTAAAGTGTCAA
GA
GATATTAGACAGGAAATAGAAAAACTAACTGCTAATTCTCAAGTGAAAAAACTAAGATGGTTCTCAGA
A
TGTTTATCTCCTCCAGGTGGCAGTGACAATTTATGGAACTTGGTTGCTGTGATAAAAGGACAGGATGAT
AGC
TTACTTCCTCAGAACTACTGCAAAGGAATAATGCACTTGAAACATCTGATTAAATTTAGAACATCTG
AA
GCTCAAGAACTAACAACAGTCAAGATGTCTAAATTTGGTGGTGGTATTGGTGTACCTGCTAAAGAGGA
A
AGACTGAAGGAAGCTGCTGAAATCCACTTGAGATTAGGACAAATTCAGAGATACTGTGAACTTATGGTT
GAA
CTTGGAGAGTGGGACAAAGCCCTGTCAATTGCACCAGGAGTCTCTGTGAAATACTGGAAGAAGTTAA
TG
CAGAGGAGAGCTGACCAATTAATCCAGGAAGATAAGGATGATGTCATTCCATACTGCATAGCCATTGG
T
GATGTGAAAAAGCTAGTCCATTTTTTCATGTCAAGAGGTCAGCTTAAAGAAGCTCTGCTTGTTGCACAG
GCT
GCTTGTGAAGGAAATATGCAGCCCTTACATGTTTCCGTGCCTAAAGGAGCTTCATATTCTGATGATA
TC
TACAAGGAAGACTTTAATGAACTCCTGCACAAAGTCAGTAAAGAACTGGCAGAATGGTATTTTCAAGA
T
GGTCGAGCAGTACTAGCCGCATGTTGCCATCTTGCCATAGATAATATTGAGCTTGCTATGGCATACCTG
ATT
CGCGGAAATGAACTGGAGTTGGCAGTCTGTGTGGGCACAGTACTAGGAGAGTCTGCAGCACCAGCAA
CC
CACTATGCCTTAGAATTACTGGCGAGAAAGTGCATGATGATTTCAGTATGCTTTCCATGTGTTGGATA
C
AGTGTCCCCTTTTGTTACGTTAACAGGAATTTGGCAGCTGATCTTCTTCTGATGATTCCTGATAATGAA
CTA
CATTTAATAAAACTCTGTGCTTTCTACCCAGGATGTACTGAAGAGATAAATGACCTTCATGATAAGT
GT
AAGCTACCCACAGTGGAAGAATGTATGCAGTTAGCTGAGACAGCCCGTGCAGATGACAATATATTTGA
A
ACTGTAAAATATTACTTGTTAAGTCAAGAACCTGAAAAAGCCCTTCCTATTGGTATTAGCTTTGTTAAA
G
AA
TACATCAGTAGCTCAGACTGGACTTTGGATACCATATACCCTGTTCTTGACCTACTGAGCTATATTC
GT
ACTGAAAAATTACTCTTGCATACGTGTACTGAAGCTCGAAATGAGTTGCTGATATTATGTGGTTACAT
T
GGTGCATTACTGGCTATCAGAAGACAGTACCAAAGCATTGTTCCAGCACTTTATGAGTACACAAGTCAG
CTA
TTAAAACGTCGGGAGGTGTCAGTACCTTTAAAAATTGAATATCTTTCTGAGGAATTGGATGCATGGA
GA
GCTTGCACACAGTCCACCAACAGATCATTAGAAGACTCTCCGTATACACCCCCTTCTGATTCACAAAG
A
ATGATTTATGCAACTTTATTAAAGAGACTAAAAGAAGAGTCACTGAAAGGAATTATTGGACCAGATTAT
GTG
ACTGGATCAAATCTTCCAAGTCATTCTGATATTCACATTTCTTGTCTTACGGGATTAAAAATCCAGG
GC
CCTGTGTTTTTCCTTGAAGACGGGAAATCTGCTATCTCCTTGAATGATGCTTTGATGTGGGCAAAGGT
G
AATCCATTCTCACCTTTAGGGACTGGAATACGACTCAATCCATTCTGA


Translation (1322 aa):
MAWMTYISNWFEQDDWYEGLQRANMSQVRQVGLLAAGCQPWNKDVCAASGDRFAYCATLAIYIYQLDHRY
N
EFKLHAIMSEHKKTITAISWCPHNPDLFASGSTDNLVIIWNVAEQKVIAKLDSTK
GIPASLSWCWNAED
V
VAFVSHRGPLFIWTISGPDSGVIVHKDAHSFLSDICMFRWHTHQKGKVVFGHIDGSLSIFHP
GNKNQKH
V
LRPESLEGTDEEDPVTALEWDPLSTDYLLVVNLHYGIRLVDSESLSCITTFNLPSAAASVQCLAWVPSA
P
GMFITG
DSQVGVLRIWNVSRTTPIDNLKLKKTGFHCLHVLNSPPRKKFSVQSPTKNHYTSSTSEAVPPP
T
LTQNQAFSLPPGHAVCCFLDGGVGLYDMGAKKWDFLRDL
GHVETIFDCKFKPDDPNLLATASFDGTIKV
W
DINTLTAVYTSPGNEGVIYSLSWAP
GGLNCIAGGTSRNGAFIWNVQKGKIIQRFNEHGTNGIFCIAWSH
K
DSKRIATCSSDGF
CIIRTIDGKVLHKYKHPAAVFGCDWSQNNKDMIATGCEDTNVRVYYVATSSDQPLK
V
FSGHTAKVFHVKWSPLREGILCSGSDD
GTVRIWDYTQDACINILNGHTAPVRGLMWNTEIPYLLISGSW
D
YTIKVWDTREGTCVDTVYDHGADVY
GLTCHPSRPFTMASCSRDSTVRLWSLTALVTPVQINILADRSWE
E
IIGNT
DYAIEPGTPPLLCGKVSRDIRQEIEKLTANSQVKKLRWFSECLSPPGGSDNLWNLVAVIKGQDD
S
LLPQNYCKGIMHLKHLIKFRT
SEAQELTTVKMSKFGGGIGVPAKEERLKEAAEIHLRLGQIQRYCELMV
E
LGE
WDKALSIAPGVSVKYWKKLMQRRADQLIQEDKDDVIPYCIAIGDVKKLVHFFMSRGQLKEALLVAQ
A
ACEGNMQPLHVSVPKGASYSDDIYKEDFN
ELLHKVSKELAEWYFQDGRAVLAACCHLAIDNIELAMAYL
I
RGNELELAVCVGTVLGESAAPATHYALELLARKCMMISV
CFPCVGYSVPFCYVNRNLAADLLLMIPDNE
L
HLIKLCAFYPGCTEEINDLHDK
CKLPTVEECMQLAETARADDNIFETVKYYLLSQEPEKALPIGISFVK
E
YISSSDWTLDTIYPVLDLLSYIRTEKLLLHTCTEARNELLILCGYIGALLAIRRQYQSIVPALYEYTSQ
L
LKRREVSVPLKIEYLSEELDAWRACTQSTN
RSLEDSPYTPPSDSQRMIYATLLKRLKEESLKGIIGPDY
V
TGSNLPSHSDIHISCLTGLKIQ
GPVFFLEDGKSAISLNDALMWAKVNPFSPLGTGIRLNPF



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser