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Report for CCDS32987.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32987.1 Public Homo sapiens 19 CEP89 24 110 108 CCDS HistoryNCBI Gene:84902Re-query CCDS DB by CCDS ID:32987.1Re-query CCDS DB by GeneID:84902See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32987.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000305768.10 ENSP00000306105.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000305768.10Link to Ensembl Protein Viewer:ENSP00000306105.4Re-query CCDS DB by Nucleotide ID:ENST00000305768Re-query CCDS DB by Protein ID:ENSP00000306105
Original member Current member NCBI NM_032816.5 NP_116205.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032816.5Link to Protein Sequence:NP_116205.3Re-query CCDS DB by Nucleotide ID:NM_032816Re-query CCDS DB by Protein ID:NP_116205Link to BLAST:NP_116205.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116205.3 783 Q96ST8-1 783 100% 0 0

Chromosomal Locations for CCDS 32987.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 32879162 32879378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 32881844 32882013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 32887752 32887841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 32899857 32899998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 32901245 32901412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 32915337 32915517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 32918224 32918339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 32923439 32923542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 32926190 32926273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 32926934 32926984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 32931429 32931571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 32933451 32933669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 32937631 32937673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 32939857 32939885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 32948266 32948368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 32953615 32953801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 32959900 32960058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 32966360 32966466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 32971836 32971874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2352 nt):
ATGCTCCTGGGATTTCGGAGAGGCCGCAGGAGTCATTTCAAACACATCATCCATGGCCTTTTACCTGCAG
CCAGCGTTGCTCCGAAGGCAGCTGTGCCACGCACACCTCCTCCCCGCAGCCCCAACCCATCTCCAGAGAG
ACCAAGATCTGCTCTGGCAGCAGCCATTCTGGCGACAACATTGACTGGGCGGACGGTTGCTATTCCTCAG
CCTCGCCAGAGGTCCCGGTCTGAGAGTGATGTGAGCAGTGTTGAACAGGACAGCTTCATCGAGCCCTATG
CCACCACCTCACAGCTGAGGCCTCGGCCAAATTGGCAGAGTGAGATGGGAAGAAGATCTTCTTTGCCATC
CTTTGAAACACTGGACTATGGGGACGAAGAGGACATTGAAACTCAGCTGTCATCCAGCGGCAAGGAATTG
GGGGATGTCAGTGCCCGGGAGGACAGAGGAGGCCACAGTGATGACCTGTACGCTGTGCCACACAGAAATC
AGGTGCCATTGTTACATGAGGTGAACAGTGAAGACGATGAAAATATTTCTCATCAAGATGGGTTTCCAGG
CTCCCCTCCTGCACCACAGCGGACACAACAAAAAGATGGTAAACACCCTGTTCTGAATTTAAAGGATGAA
AAACCTCCATTATGTGAGAAACCTCCACCCTCCCCAGATATAACTGGTAGAGCACGTCAAAGATATACAG
AAATAACCAGAGAAAAGTTTGAGGCATTAAAAGAAGAAAATATGGACCTAAACAATATGAATCAAAGCCT
TACCCTTGAACTAAACACAATGAAACAAGCAATGAAAGAACTACAGTTAAAACTTAAGGGAATGGAAAAA
GAGAAGAGAAAGCTCAAAGAGGCTGAGAAGGCGTCGTCACAGGAAGTTGCTGCACCTGAATTACTTTATC
TGCGAAAACAAGCTCAAGAACTGGTGGATGAAAATGATGGATTGAAAATGACTGTCCATCGTTTGAATGT
AGAACTCAGTCGATATCAGACAAAATTCAGGCATTTGTCCAAGGAAGAGAGCTTAAATATTGAAGGCCTC
CCATCCAAGGGCCCTATACCACCCTGGTTGTTGGATATAAAGTACCTGTCACCATTGTTGCTGGCTTATG
AAGATATGATGAAAGAGAAGGACGAGCTCAATGCCACCCTCAAGGAGGAAATGAGAATGTTTAGGATGCG
AGTCCAAGAAGTGGTGAAAGAAAATGAAGAATTGCACCAAGAGTTAAATAAGAGTAGTGCTGTTACCAGT
GAGGAATGGCGTCAGCTTCAGACTCAAGCAAAACTGGTTTTAGAGGAAAACAAGTTGTTGCTGGAGCAGT
TGGAGATTCAGCAAAGGAAAGCCAAGGACAGCCACCAGGAGCGCCTCCAAGAAGTTTCTAAGCTGACTAA
ACAACTAATGCTCCTGGAGGCAAAAACCCACGGCCAGGAAAAGGAGCTGGCGGAGAACAGGGAACAGCTG
GAGATTTTACGTGCCAAATGCCAAGAACTCAAAACACACTCGGATGGCAAAATCGCAGTGGAAGTTCATA
AATCAATTGTGAATGAATTAAAAAGCCAATTACAGAAGGAAGAAGAGAAAGAAAGGGCTGAGATGGAGGA
GTTGATGGAGAAGCTGACAGTCCTGCAAGCGCAGAAGAAGAGCCTGCTGTTAGAGAAGAACAGTTTGACA
GAGCAAAACAAAGCACTGGAAGCCGAACTTGAACGAGCACAGAAAATCAATAGGAAATCTCAAAAGAAAA
TTGAGGTCCTCAAAAAGCAGGTGGAAAAAGCCATGGGGAACGAAATGTCTGCTCATCAGTACCTGGCAAA
CCTTGTTGGCCTGGCAGAAAACATAACCCAGGAACGTGACAGTCTTATGTGTTTGGCAAAATGTTTAGAA
AGTGAGAAGGATGGAGTGCTTAATAAAGTCATAAAAAGCAACATTCGCCTGGGAAAGTTAGAGGAAAAAG
TCAAGGGCTACAAGAAGCAGGCAGCACTGAAGCTGGGGGACATCAGTCACCGTCTGCTGGAGCAGCAGGA
GGACTTCGCCGGCAAGACAGCCCAGTACCGGCAGGAGATGCGGCACCTGCACCAGGTGCTGAAGGACAAG
CAGGAGGTGCTGGACCAGGCGCTGCAGCAGAACAGAGAAATGGAAGGTGAACTTGAAGTTATTTGGGAAT
CTACCTTCAGGGAAAACCGAAGAATCCGAGAACTTCTCCAGGACACACTCACGAGGACAGGCGTGCAGGA
CAACCCCAGAGCTCTGGTTGCCCCCAGCCTCAATGGCGTCTCTCAGGCAGACCTGCTGGACGGCTGCGAT
GTCTGCTCCTATGACCTGAAGTCTCATGCCCCCACCTGCTAG

Translation (783 aa):
MLLGFRRGRRSHFKHIIHGLLPAASVAPKAAVPRTPPPRSPNPSPERPRSALAAAILATTLTGRTVAIPQ
PRQRSRSESDVSSVEQDSFIEPYATTSQLRPRPNWQSEMGRRSSLPSFETLDYGDEEDIETQLSSSGKEL
GDVSAREDRGGHSDDLYAVPHRNQVPLLHEVNSEDDENISHQDGFPGSPPAPQRTQQKDGKHPVLNLKDE
KPPLCEKPPPSPDITGRARQRYTEITREKFEALKEENMDLNNMNQSLTLELNTMKQAMKELQLKLKGMEK
EKRKLKEAEKASSQEVAAPELLYLRKQAQELVDENDGLKMTVHRLNVELSRYQTKFRHLSKEESLNIEGL
PSKGPIPPWLLDIKYLSPLLLAYEDMMKEKDELNATLKEEMRMFRMRVQEVVKENEELHQELNKSSAVTS
EEWRQLQTQAKLVLEENKLLLEQLEIQQRKAKDSHQERLQEVSKLTKQLMLLEAKTHGQEKELAENREQL
EILRAKCQELKTHSDGKIAVEVHKSIVNELKSQLQKEEEKERAEMEELMEKLTVLQAQKKSLLLEKNSLT
EQNKALEAELERAQKINRKSQKKIEVLKKQVEKAMGNEMSAHQYLANLVGLAENITQERDSLMCLAKCLE
SEKDGVLNKVIKSNIRLGKLEEKVKGYKKQAALKLGDISHRLLEQQEDFAGKTAQYRQEMRHLHQVLKDK
QEVLDQALQQNREMEGELEVIWESTFRENRRIRELLQDTLTRTGVQDNPRALVAPSLNGVSQADLLDGCD
VCSYDLKSHAPTC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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