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Report for CCDS31757.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31757.1 Public Homo sapiens 12 SPX 24 110 108 CCDS HistoryNCBI Gene:80763Re-query CCDS DB by CCDS ID:31757.1Re-query CCDS DB by GeneID:80763See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31757.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000256969.7 ENSP00000256969.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000256969.7Link to Ensembl Protein Viewer:ENSP00000256969.2Re-query CCDS DB by Nucleotide ID:ENST00000256969Re-query CCDS DB by Protein ID:ENSP00000256969
Original member Current member NCBI NM_030572.4 NP_085049.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_030572.4Link to Protein Sequence:NP_085049.1Re-query CCDS DB by Nucleotide ID:NM_030572Re-query CCDS DB by Protein ID:NP_085049Link to BLAST:NP_085049.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_085049.1 116 Q9BT56 116 100% 0 0

Chromosomal Locations for CCDS 31757.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 21526473 21526478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 21526886 21526966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 21527135 21527192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 21527727 21527789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 21529001 21529084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 21531137 21531195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (351 nt):
ATGAAGGGACTCAGAAGTCTGGCAGCAACAACCTTGGCTCTTTTCCTGGTGTTTGTTTTCCTGGGAAACT
CCAGCTGCGCTCCGCAGAGACTGTTGGAGAGAAGGAACTGGACTCCTCAAGCTATGCTCTACCTGAAAGG
GGCACAGGGTCGCCGCTTCATCTCCGACCAGAGCCGGAGAAAGGACCTCTCCGACCGGCCACTGCCGGAA
AGACGAAGCCCAAATCCCCAACTACTAACTATTCCGGAGGCAGCAACCATCTTACTGGCGTCCCTTCAGA
AATCACCAGAAGATGAAGAAAAAAACTTTGATCAAACCAGATTCCTGGAAGACAGTCTGCTTAACTGGTG
A

Translation (116 aa):
MKGLRSLAATTLALFLVFVFLGNSSCAPQRLLERRNWTPQAMLYLKGAQGRRFISDQSRRKDLSDRPLPE
RRSPNPQLLTIPEAATILLASLQKSPEDEEKNFDQTRFLEDSLLNW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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