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Report for CCDS31119.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31119.1 Public Homo sapiens 1 OR2G6 22 109 92 CCDS HistoryNCBI Gene:391211Re-query CCDS DB by CCDS ID:31119.1Re-query CCDS DB by GeneID:391211See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31119.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI,WTSI ENST00000343414.6 ENSP00000341291.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000343414.6Link to Ensembl Protein Viewer:ENSP00000341291.4Re-query CCDS DB by Nucleotide ID:ENST00000343414Re-query CCDS DB by Protein ID:ENSP00000341291
Original member Current member EBI,WTSI ENST00000641501.1 ENSP00000492940.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000641501.1Link to Ensembl Protein Viewer:ENSP00000492940.1Re-query CCDS DB by Nucleotide ID:ENST00000641501Re-query CCDS DB by Protein ID:ENSP00000492940
Original member Current member EBI,WTSI ENST00000641804.1 ENSP00000493355.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000641804.1Link to Ensembl Protein Viewer:ENSP00000493355.1Re-query CCDS DB by Nucleotide ID:ENST00000641804Re-query CCDS DB by Protein ID:ENSP00000493355
Original member Current member NCBI NM_001013355.1 NP_001013373.1 Accepted alive Link to Nucleotide Sequence:NM_001013355.1Link to Protein Sequence:NP_001013373.1Re-query CCDS DB by Nucleotide ID:NM_001013355Re-query CCDS DB by Protein ID:NP_001013373Link to BLAST:NP_001013373.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001013373.1 316 Q5TZ20 316 100% 0 0

Chromosomal Locations for CCDS 31119.1

Assembly GRCh38.p12 (GCF_000001405.38)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 248521647 248522597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGGAGGAAACCAACAACAGCTCTGAAAAGGGATTTCTTCTCCTGGGATTTTCAGATCAGCCTCAGCTAG
AG
AGGTTTCTTTTTGCCATCATTTTGTACTTCTACGTCTTGAGCCTTCTGGGGAACACTGCCCTCATACT
A
GTATGTTGTCTGGACTCCAGACTCCACACTCCAATGTACTTCTTCCTCAGCAACCTCTCGTGTGTGGAC
ATC
TGCTTTACCACCAGTGTTGCCCCACAGTTGCTGGTTACCATGAATAAGAAAGACAAAACCATGAGCT
AC
GGTGGCTGTGTGGCCCAGCTCTATGTGGCCATGGGGTTGGGCTCGTCTGAGTGTATTCTCTTGGCCGT
C
ATGGCTTATGACCGCTATGCTGCTGTCTGCCGGCCACTGCGCTACATAGCCATTATGCACCCCAGGTTC
TGT
GCGTCTCTGGCCGGTGGAGCATGGCTCAGCGGCCTCATCACCTCCCTAATTCAGTGCTCCCTCACTG
TG
CAGCTGCCCCTCTGTGGTCATCGCACACTGGATCATATTTTCTGTGAGGTGCCAGTGCTCATCAAACT
G
GCCTGTGTGGATACGACTTTCAACGAGGCAGAACTCTTTGTGGCCAGTGTAGTCTTTCTAATTGTCCCG
GTG
TTACTCATCTTAGTCTCCTATGGCTTTATCACTCAAGCTGTGTTAAGGATAAAATCAGCTGCGGGCC
GC
CAAAAGGCCTTTGGGACCTGTTCGTCTCACCTGGTTGTGGTCATCATTTTCTATGGGACCATCATATT
C
ATGTACCTTCAACCGGCCAATAGGAGATCCAAAAACCAGGGAAAGTTTGTTTCTCTTTTCTATACCATA
GTC
ACCCCACTTTTAAACCCCATTATCTACACTCTGAGAAACAAAGATGTGAAAGGGGCCTTGAGGACCC
TG
ATACTGGGTAGTGCTGCTGGACAAAGCCACAAGGACTAG


Translation (316 aa):
MEETNNSSEKGFLLLGFSDQPQLERFLFAIILYFYVLSLLGNTALILVCCLDSRLHTPMYFFLSNLSCVD
I
CFTTSVAPQLLVTMNKKDKTMSYGGCVAQLYVAMGLGSSECILLAVMAYDRYAAVCRPLRYIAIMHPRF
C
ASLAGGAWLSGLITSLIQCSLTVQLPLCGHRTLDHIFCEVPVLIKLACVDTTFNEAELFVASVVFLIVP
V
LLILVSYGFITQAVLRIKSAAGRQKAFGTCSSHLVVVIIFYGTIIFMYLQPANRRSKNQGKFVSLFYTI
V
TPLLNPIIYTLRNKDVKGALRTLILGSAAGQSHKD




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser