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Report for CCDS31114.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31114.1 Public Homo sapiens 1 OR2T6 24 110 108 CCDS HistoryNCBI Gene:254879Re-query CCDS DB by CCDS ID:31114.1Re-query CCDS DB by GeneID:254879See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31114.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000641644.1 ENSP00000493366.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641644.1Link to Ensembl Protein Viewer:ENSP00000493366.1Re-query CCDS DB by Nucleotide ID:ENST00000641644Re-query CCDS DB by Protein ID:ENSP00000493366
Original member Current member NCBI NM_001005471.2 NP_001005471.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005471.2Link to Protein Sequence:NP_001005471.1Re-query CCDS DB by Nucleotide ID:NM_001005471Re-query CCDS DB by Protein ID:NP_001005471Link to BLAST:NP_001005471.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005471.1 308 Q8NHC8 308 100% 0 0

Chromosomal Locations for CCDS 31114.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 248387609 248388535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (927 nt):
ATGAATGAAAACAATGAAACCTTGACCAGAGGCTTTACCCTCATGGGGCTCTTCACTCACAATAAATGCT
CAGGATTCTTTTTCGGTGTCATTTGTGCCGTCTTCTTCATGGCCATGATAGCTAATGGGGTCATGATCTT
CCTGATTAACATAGACCCTCATCTCCACACCCCCATGTACTTCCTCCTCAGCCACCTCTCCGTCATTGAC
ACATTATACATCTCCACCATTGTGCCCAAGATGCTGGTAGATTATCTCATGGGCGAGGGGACCATCTCTT
TCATCGCCTGCACTGCTCAGTGCTTTCTCTACATGGGCTTTATGGGGGCTGAATTCTTCCTGCTGGGGCT
CATGGCCTATGACCGCTACGTGGCCATCTGCAACCCACTGCGCTATCCTGTCCTCATCAGCTGGCGGGTC
TGCTGGATGATCCTGGCCAGCTCTTGGTTCGGTGGGGCTTTGGACAGTTTTCTCCTCACCCCCATTACCA
TGAGTCTCCCGTTCTGTGCCTCTCACCAAATCAATCACTTTTTCTGTGAGGCACCCACCATGCTGAGGCT
GGCCTGTGGGGACAAAACCACCTATGAAACAGTGATGTATGTGTGCTGCGTTGCAATGCTGCTGATCCCC
TTCTCGGTGGTGACTGCATCCTACACCAGGATTCTCATCACAGTGCATCAGATGACATCGGCTGAAGGGA
GGAAGAAGGCCTTTGCCACCTGCTCTTCACACATGATGGTGGTGACATTGTTCTATGGGGCTGCCTTGTA
TACGTATACGCTTCCCCAATCTTACCACACCCCAATCAAAGATAAGGTCTTCTCTGCCTTTTATACCATC
CTCACACCCTTATTAAACCCTCTCATCTACAGTCTGAGGAACAGGGATGTGATGGGTGCCTTGAAGAGAG
TTGTGGCAAGATGTTAG

Translation (308 aa):
MNENNETLTRGFTLMGLFTHNKCSGFFFGVICAVFFMAMIANGVMIFLINIDPHLHTPMYFLLSHLSVID
TLYISTIVPKMLVDYLMGEGTISFIACTAQCFLYMGFMGAEFFLLGLMAYDRYVAICNPLRYPVLISWRV
CWMILASSWFGGALDSFLLTPITMSLPFCASHQINHFFCEAPTMLRLACGDKTTYETVMYVCCVAMLLIP
FSVVTASYTRILITVHQMTSAEGRKKAFATCSSHMMVVTLFYGAALYTYTLPQSYHTPIKDKVFSAFYTI
LTPLLNPLIYSLRNRDVMGALKRVVARC


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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