NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS28846.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
28846.1 Public Mus musculus 17 Mrps10 23 108 98 CCDS HistoryNCBI Gene:64657Re-query CCDS DB by CCDS ID:28846.1Re-query CCDS DB by GeneID:64657See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 28846.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000060752.12 ENSMUSP00000055301.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000060752.12Link to Ensembl Protein Viewer:ENSMUSP00000055301.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000060752Re-query CCDS DB by Protein ID:ENSMUSP00000055301
Original member Current member EBI ENSMUST00000119841.7 ENSMUSP00000112740.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000119841.7Link to Ensembl Protein Viewer:ENSMUSP00000112740.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000119841Re-query CCDS DB by Protein ID:ENSMUSP00000112740
Original member Current member NCBI NM_183086.2 NP_898909.2 Accepted alive Link to Nucleotide Sequence:NM_183086.2Link to Protein Sequence:NP_898909.2Re-query CCDS DB by Nucleotide ID:NM_183086Re-query CCDS DB by Protein ID:NP_898909Link to BLAST:NP_898909.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_898909.2 160 Q80ZK0 160 99.375% 0 1

Chromosomal Locations for CCDS 28846.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 47372583 47372645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 47374973 47375109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 47375934 47376042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 47377760 47377849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 47378202 47378285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (483 nt):
ATGAAGTGGGTGCCACTGTCAAACCTGCATGTGGACGTCCCAAAGGATGTGACCAGACCTACGATAACCA
CT
TCCGATGAGCCAGACACGTTGTACAAACGCCTGTCCATCTTAGTGAAAGCCCATGACAGGGCTGTGTT
A
GACAGCTATGAGTACTTTGCTGTGCTCGCTGCTAAAGAACTTGGCATTTCTATTAAAGTACACGAGCCG
CCA
AGGAAAATAGAGCGCTTCACTCTTCTCAAGTCGGTGCACATCTTCAAGAAACACAGAGTCCAGTATG
AG
ATGAGGACACTCTACAGATGTTTGGAGTTAAAACATTTGACTGGAAGCACAGCCAGTGTCTACCTGGA
G
TATATCCAGCGAAACTTGCCTGAAGGGGTGGCCATGGAAGTGACAAAGACGCAGATACAGCAGTTGCCA
GAA
CACATCAAGGAACCGATGTGGGAAACAGTTCCCGAGGAGAAGGAAGAAAGCAAGTCGTAA


Translation (160 aa):
MKWVPLSNLHVDVPKDVTRPTITTSDEPDTLYKRLSILVKAHDRAVLDSYEYFAVLAAKELGISIKVHEP
P
RKIERFTLLKSVHIFKKHRVQYEMRTLYRCLE
LKHLTGSTASVYLEYIQRNLPEGVAMEVTKTQIQQLP
E
HIKEPMWETVPEEKEESKS




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser