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Report for CCDS26063.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26063.1 Public Mus musculus 12 Erg28 23 108 98 CCDS HistoryNCBI Gene:58520Re-query CCDS DB by CCDS ID:26063.1Re-query CCDS DB by GeneID:58520See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26063.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000021676.11 ENSMUSP00000021676.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000021676.11Link to Ensembl Protein Viewer:ENSMUSP00000021676.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000021676Re-query CCDS DB by Protein ID:ENSMUSP00000021676
Original member Current member NCBI NM_001360451.1 NP_001347380.1 Accepted alive Link to Nucleotide Sequence:NM_001360451.1Link to Protein Sequence:NP_001347380.1Re-query CCDS DB by Nucleotide ID:NM_001360451Re-query CCDS DB by Protein ID:NP_001347380Link to BLAST:NP_001347380.1
Original member Current member NCBI NM_021446.3 NP_067421.1 Accepted alive Link to Nucleotide Sequence:NM_021446.3Link to Protein Sequence:NP_067421.1Re-query CCDS DB by Nucleotide ID:NM_021446Re-query CCDS DB by Protein ID:NP_067421Link to BLAST:NP_067421.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001347380.1 140 Q9ERY9 140 100% 0 0
NP_067421.1 140 Q9ERY9 140 100% 0 0

Chromosomal Locations for CCDS 26063.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 85816114 85816193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 85816316 85816434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 85819479 85819569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 85822088 85822220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (423 nt):
ATGAGCCGCTTCCTGAATGTGTTACGAAGCTGGCTGGTTATGGTGTCCATTATAGCCATGGGGAACACAC
TCCAGAGCTTCCGAGACCACACTTTTCTCTACGAGAAGCTCTACACTGGCAAGCCAAACCTTGTGAATGG
CCTCCAAGCCCGGACCTTTGGGATCTGGACGCTGCTCTCATCAGTGATTCGCTGCCTCTGTGCCATTGAC
ATCCACAACAAAACACTCTATCACATCACACTGTGGACATTCCTCCTCGCCCTGGGACACTTCCTCTCAG
AGTTGTTTGTATTTGGAACAGCAGCTCCCACAGTTGGTGTGCTGGCACCCCTGATGGTAGCAAGTTTCTC
AATCCTGGGCATGCTGGTCGGGCTCCGGTACCTAGAGGCAGAACCAGTATCCAGACAGAAGAAAAGAAAT
TGA

Translation (140 aa):
MSRFLNVLRSWLVMVSIIAMGNTLQSFRDHTFLYEKLYTGKPNLVNGLQARTFGIWTLLSSVIRCLCAID
IHNKTLYHITLWTFLLALGHFLSELFVFGTAAPTVGVLAPLMVASFSILGMLVGLRYLEAEPVSRQKKRN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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