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Report for CCDS23739.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23739.1 Public Mus musculus 10 Taar6 23 108 98 CCDS HistoryNCBI Gene:215855Re-query CCDS DB by CCDS ID:23739.1Re-query CCDS DB by GeneID:215855See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 23739.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000057080.3 ENSMUSP00000097603.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000057080.3Link to Ensembl Protein Viewer:ENSMUSP00000097603.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000057080Re-query CCDS DB by Protein ID:ENSMUSP00000097603
Original member Current member NCBI NM_001010828.1 NP_001010828.1 Accepted alive Link to Nucleotide Sequence:NM_001010828.1Link to Protein Sequence:NP_001010828.1Re-query CCDS DB by Nucleotide ID:NM_001010828Re-query CCDS DB by Protein ID:NP_001010828Link to BLAST:NP_001010828.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001010828.1 345 Q5QD13 345 100% 0 0

Chromosomal Locations for CCDS 23739.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 23984609 23985646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1038 nt):
ATGGGCAGTAACTCGTCTCCGCCCACCGTCCTGCAGCTCTGCTATGAGAATGTGACCGGGTCTTGTGTGA
AAACCCCCTACTCTCCTGGGTCGAGGGTCATCCTCTATGCAGTCTTTGGCTTTGGGGCTGTGCTGGCAGT
GTTTGGAAACCTCATGGTGATGATATCCATCCTCCATTTCAAGCAGCTGCACTCTCCCACCAATTTCCTC
ATTGCATCCTTGGCCTGTGCTGACTTTGGTGTGGGCATCTCTGTGATGCCCTTCAGCATGGTCAGGTCCA
TCGAGAGCTGCTGGTACTTTGGTAGAAGTTTCTGCACTTTCCACACCTGCTGTGATGTGGCGTTCTGTTA
CTCTTCTCTCTTCCACCTGAGCTTCATCTCCATCGACAGGTACATCGCTGTCACGGACCCTCTGGTCTAT
CCCACCAAGTTCACGGTGTCTGTGTCTGGAATTTGCATCGGCGTCTCCTGGATTCTGCCCCTGGTGTACA
GCGGCGCTGTGTTCTACACAGGGGTTTATGATGACGGCCTGGAGGAATTATCCAGTGCCCTCAACTGCGT
AGGGGGCTGTCAGGTAGTTGTGAATCAGAACTGGGTGCTGATAGATTTTCTTTCCTTCTTAATACCTACA
CTTGTTATGATAATTCTGTATGGTAATATTTTTCTGGTAGCTAGACAACAGGCTAAAAAGATAGAAAATA
TTGGGAGCAAAACAGAATCATCCTCTGAGAGCTACAAAGCCAGAGTGGCGAGAAGAGAAAGAAAAGCAGC
CAAAACCCTGGGGATTACCGTGGTAGCATTCATGATATCATGGTTGCCCTACAGCATTGATTCATTAGTT
GATGCTTTTATGGGCTTCATCACCCCTGCCTACATTTATGAAATCTGTGTTTGGTGTGCTTATTACAACT
CAGCCATGAACCCTCTGATCTACGCTTTATTTTATCCATGGTTTAAGAAAGCTATTAAGGTTATTATGAG
TGGCCAGGTGTTCAAGAACAGCTCAGCCACTATGAACTTGTTCTCTGAGCAAATATAA

Translation (345 aa):
MGSNSSPPTVLQLCYENVTGSCVKTPYSPGSRVILYAVFGFGAVLAVFGNLMVMISILHFKQLHSPTNFL
IASLACADFGVGISVMPFSMVRSIESCWYFGRSFCTFHTCCDVAFCYSSLFHLSFISIDRYIAVTDPLVY
PTKFTVSVSGICIGVSWILPLVYSGAVFYTGVYDDGLEELSSALNCVGGCQVVVNQNWVLIDFLSFLIPT
LVMIILYGNIFLVARQQAKKIENIGSKTESSSESYKARVARRERKAAKTLGITVVAFMISWLPYSIDSLV
DAFMGFITPAYIYEICVWCAYYNSAMNPLIYALFYPWFKKAIKVIMSGQVFKNSSATMNLFSEQI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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