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Report for CCDS23496.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23496.1 Public Mus musculus 9 Hyal2 23 108 98 CCDS HistoryNCBI Gene:15587Re-query CCDS DB by CCDS ID:23496.1Re-query CCDS DB by GeneID:15587See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23496.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000010191.12 ENSMUSP00000010191.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000010191.12Link to Ensembl Protein Viewer:ENSMUSP00000010191.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000010191Re-query CCDS DB by Protein ID:ENSMUSP00000010191
Original member Current member EBI ENSMUST00000195752.5 ENSMUSP00000141280.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000195752.5Link to Ensembl Protein Viewer:ENSMUSP00000141280.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000195752Re-query CCDS DB by Protein ID:ENSMUSP00000141280
Original member NCBI NM_010489.2 NP_034619.2 Updated not alive Link to Nucleotide Sequence:NM_010489.2Link to Protein Sequence:NP_034619.2Re-query CCDS DB by Nucleotide ID:NM_010489Re-query CCDS DB by Protein ID:NP_034619
Current member NCBI NM_010489.3 NP_034619.2 Accepted alive Link to Nucleotide Sequence:NM_010489.3Link to Protein Sequence:NP_034619.2Re-query CCDS DB by Nucleotide ID:NM_010489Re-query CCDS DB by Protein ID:NP_034619Link to BLAST:NP_034619.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034619.2 473 O35632 473 100% 0 0

Chromosomal Locations for CCDS 23496.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 107570150 107571070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107571492 107571581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107572058 107572468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1422 nt):
ATGCGGGCAGGACTAGGTCCCATCATCACACTGGCCCTAGTGCTGGAGGTAGCATGGGCCGGGGAGCTTA
AGCCCACAGCGCCGCCCATCTTCACTGGCCGACCCTTTGTGGTAGCATGGAACGTGCCCACACAAGAATG
TGCCCCACGCCACAAAGTGCCACTGGACCTTAGGGCCTTCGATGTGAAGGCTACACCGAATGAGGGTTTT
TTCAACCAGAATATCACCACCTTCTACTACGACCGTCTAGGCCTGTATCCACGTTTTGATGCAGCCGGGA
CATCTGTGCATGGCGGTGTGCCTCAGAACGGCAGCCTCTGTGCACACCTGCCCATGCTGAAGGAATCTGT
GGAACGCTACATCCAGACCCAGGAGCCTGGGGGGCTGGCAGTCATTGACTGGGAGGAATGGCGGCCTGTA
TGGGTTCGAAACTGGCAGGAGAAAGATGTTTACCGACAGTCTTCACGCCAGCTGGTGGCCAGTCGGCACC
CTGACTGGCCATCAGACAGAGTAATGAAGCAGGCCCAGTACGAGTTTGAGTTCGCCGCTCGGCAGTTCAT
GTTGAACACTCTCCGTTACGTCAAGGCAGTCAGACCCCAGCACCTGTGGGGCTTCTACCTCTTTCCTGAC
TGCTACAATCACGATTATGTACAGAACTGGGAGAGCTACACGGGCCGCTGTCCCGATGTGGAGGTGGCAC
GGAACGACCAGCTGGCCTGGCTCTGGGCTGAGAGCACGGCTCTCTTTCCCTCTGTGTACCTGGACGAGAC
ACTGGCGTCCTCCGTACACAGCCGCAACTTTGTCAGTTTCCGTGTTCGGGAGGCCCTTCGAGTGGCTCAC
ACCCACCATGCCAACCACGCCCTCCCCGTGTACGTCTTCACGCGTCCCACATACACCCGAGGACTCACGG
GACTGAGCCAGGTGGACCTTATCTCTACCATCGGTGAGAGTGCCGCCCTGGGCTCAGCTGGCGTCATCTT
CTGGGGCGACTCGGAAGACGCTTCAAGTATGGAGACCTGCCAATACCTCAAGAATTACCTAACTCAGCTG
CTGGTTCCCTACATAGTCAACGTGTCCTGGGCCACCCAGTATTGCAGTTGGACCCAGTGCCATGGCCATG
GGCGATGTGTGCGCCGCAACCCCAGCGCCAATACCTTCCTGCACCTCAATGCCAGCAGCTTCCGCCTAGT
GCCTGGCCATACCCCCAGTGAACCCCAGCTTCGACCCGAGGGGCAGCTCAGCGAAGCCGACCTCAACTAC
CTGCAGAAGCACTTTCGCTGCCAGTGCTATCTGGGCTGGGGTGGCGAGCAGTGCCAACGGAACTATAAGG
GGGCAGCTGGAAATGCCAGCAGAGCCTGGGCTGGATCCCACCTCACCAGCCTGCTGGGTTTGGTAGCTGT
GGCTCTCACCTGGACCTTATGA

Translation (473 aa):
MRAGLGPIITLALVLEVAWAGELKPTAPPIFTGRPFVVAWNVPTQECAPRHKVPLDLRAFDVKATPNEGF
FNQNITTFYYDRLGLYPRFDAAGTSVHGGVPQNGSLCAHLPMLKESVERYIQTQEPGGLAVIDWEEWRPV
WVRNWQEKDVYRQSSRQLVASRHPDWPSDRVMKQAQYEFEFAARQFMLNTLRYVKAVRPQHLWGFYLFPD
CYNHDYVQNWESYTGRCPDVEVARNDQLAWLWAESTALFPSVYLDETLASSVHSRNFVSFRVREALRVAH
THHANHALPVYVFTRPTYTRGLTGLSQVDLISTIGESAALGSAGVIFWGDSEDASSMETCQYLKNYLTQL
LVPYIVNVSWATQYCSWTQCHGHGRCVRRNPSANTFLHLNASSFRLVPGHTPSEPQLRPEGQLSEADLNY
LQKHFRCQCYLGWGGEQCQRNYKGAAGNASRAWAGSHLTSLLGLVAVALTWTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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