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Report for CCDS21904.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21904.1 Public Mus musculus 7 Tacc2 23 108 98 CCDS HistoryNCBI Gene:57752Re-query CCDS DB by CCDS ID:21904.1Re-query CCDS DB by GeneID:57752See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21904.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000059145.13 ENSMUSP00000061242.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000059145.13Link to Ensembl Protein Viewer:ENSMUSP00000061242.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000059145Re-query CCDS DB by Protein ID:ENSMUSP00000061242
Original member Current member NCBI NM_206856.4 NP_996738.2 Accepted alive Link to Nucleotide Sequence:NM_206856.4Link to Protein Sequence:NP_996738.2Re-query CCDS DB by Nucleotide ID:NM_206856Re-query CCDS DB by Protein ID:NP_996738Link to BLAST:NP_996738.2

Chromosomal Locations for CCDS 21904.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 130577484 130577516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130601837 130601937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130663016 130663141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130674602 130674739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130716703 130716839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130728523 130729828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130731531 130731566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130733506 130733566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130734949 130735150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130739812 130739873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130740840 130740955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130742130 130742301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130743544 130743684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130744527 130744616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130751190 130751333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130751834 130751910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130753618 130753661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130759165 130759325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130759534 130759640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130759915 130760035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130764254 130764319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3441 nt):
ATGGGCAACGAGAACAGCACCTCGGACCACCAGAGGACTTCTTCAGTTCAGAGTCCAAGGTCACTGCAGC
CACCTGGGAAGAGTCAATCTCTACAGAAGCAACAAGGAGACTTGCCTGGATCGTGTGCTGGAAGTATCCC
TGGAACTGATGATGTCATCCAGCCAGCTGCTCCTGTTGACCCGGGACACCCACCCTTAGCTGACTCGTCC
CACCATGGTGACGCTGTCAGCTCAGTCTCTACACATCTGACAGTCCAGAGCGCCTCCCCATCTGCTGCCC
GTGCAAGTCCTGCTCCTTTGGCCCCAGAACATACAGCCTCGGCTCCCTCCGCAGCCGGTCCTGGAGTAGA
AGTCACCCCCACTGCCTCCCCCCAACACCTGGCCAAGAACGAACCCAGGAGTTCCGACTCTGAGGAAGCC
TTTGAGACCCCCGAGTCAACGACCCCTGTCAAAGCTCCACCAGCCCCTCCCCCTCCACCCCCTGAAGTCA
CCCCAGAGCCTGAGGTCATCGATCCACCAGCCCCAGAAGAACCAGGATGCATTTCTGAGCCACCGGTTGT
GGTTCCCGATGGCCCTCGCAGCAGCGAGTCCGTGGAAGGAAGCCCTTTCCGTCCTTCCCACTCCTCCTCG
GCGGTGTTCGATGAAGACAAGCCGATAGCCAGCAGCGGGACTTACAACTTAGACTTCGACAGCATCGAGC
TGGTGGATAACTTCCAGAGCTTGGAGCCGTGCTCTGCCGACTCTAAGGGTCAGGAGTGTAAGGTGAGCAC
GCGGAGGAAATCCACCGAGTCCGTGCCACCCTCCAAGTCCACGCTGTCCCGTTCGCTTAGCCTACAAGCC
AGTGACTTTGACGGTGCTTCTTGCCCCGGCAGCCCTGAAGCTGGGACCCTTACCACAGATGCATGTGGCA
CAGGATCCAACAGTGCTTCCAGCACCCTTAAGCGAACTAAAAAAACACGGCCACCTTCCTTGAAAAAGAA
GCAAGCCACCAAGAAACCCACAGAAACCCCCCCAGTGAAGGAGACCCAACAGGAACCAGGTGAAGAGAGT
CCAGTCCCCAGTGAGGAACACTTAGCACCAGAGACAAAGACGGAGTCGGCCACACCTGAGGGCGCTGGTT
GCACCTTGTCAGACGATACACCCCTGGAGTCCCCTGCTGTCCCCACAGCCACCTGTCCTCTGACTTTGGA
GAGTGCAGAAGACGTTAGCCCCCTGGTTTCTGGAGGTGGCAGAGTGCAGAACTCACCCCCAGTTGGGAGG
AAATCAGTGCCTCTTACCACAGCCTCTGAGGCGGTGGAGGTGACCCTGTCGGACAGTGGGGGGCAAGAGG
ACTTGCCTGCCAAGGGGTTGTCAGTGAGGCTGGAGTTTGACTATTCTGAGGACAAGGGAAGTTGGGAGAG
TCAGCAGGAAAACGCCCCTCCCACCAAAAAGATAGGCAAGAAGCCAGTTGCCAAAATGCCCCTAAGGAGG
CCAAAGATGAAAAAGACCCCCGAGAAACTTGACAACACTCCTGCCTCACCTCCAAGGTCCCCTACTGAAC
CCAGTGACACCCCTATTGCTAAAGGTACCTACACCTTTGATATAGACAAGTGGGATGACCCCAATTTTAA
CCCTTTTTCCTCCACCTCAAAAATGCAAGAGTCTCCCAAACTGTCCCAACAATCGTACAACTTTGACCCT
GACGCCTGTGAAGAGTCCCTTGACCCCTTTAAGGCATCCTCTAAGACCCCCAGCTCACCTTCTAAGTCCC
CAGCCTCTTTTGAGATCCCAGCCAGCACCACGGAAGCGGATGGGGATGGGTTGAATAAACCTGCCAAGAA
GAAGAAGACTCCACTAAAGACGATGGTTGAAGATGTGATGTCTGTGTGTTCTCTGTTTGACACGTTTAGG
GTGAAGAAGTCTCCAAAGCGGTCTCCTCTGTCTGACCCGCCTTCTCAGGACCCCACTCCAGCTGCCACGC
CGGAAGCACCCTCAGCCATCTCTACAGTGGTCCACGCCACAGATGAGGAGAAGCTGGCAGTCACTAGCCA
GAAGTGGACGTGTATGACGGTGGACTTGGATGCTGACAAACAGGACTTCCCTCAGCCCTCGGACCTGTCT
AACTTTGTAAATGAGACCAAATTCAATTCACCCTCAGAGGAGCTGGACTACAGAAACTCCTATGAAATTG
AATACATGGAAAAGCTTGGCTCCTCCTTACCTCAGGACGATGACACTCCGAAGAAGCAGGCCTTGTACCT
TATGTTTGACACTCCTCAGGAGAGCCCCGTCAAGTCTCCTCCAGTCCGGATGTCAGATTCCCCAACTCCA
TGTTCAGGGTCGAGTTTTGAGGACACCGAAGCCCTTGTGAATGCAGCAACAAAGCTCCAGCATCCAGTCG
CAAGAGGTCTGCCCTCCAGTCAGGAGCCTCTCTTGCAGGTGCCTGAGAAGCCCTCCCAGAAGGAGCTGGA
GGCCATGGCCTTGGGCACCCCAGCAGAAGCAATTGAAATCACAGCTCCCGAGGGTGCCTTTGCTTCTGCA
GATACCCTCCTCAGCAGGCTGGCCCATCCCGCCTCTCTCTGTGGTGCACTTGGCTATCTGGAGCCTGACT
TAGCAGAAAAGAACCCCCCAGTATTTGCCCAGAAACTTCAGGAGGAGTTAGAGTTTGCTGTCATGCGGAT
AGAAGCCCTGAAGCTGGCCAGGCAGATCGCCCTGGCTTCCCGCAGCCGCCAGGACACCAAGAGGGAAGCT
GCTCACCCACCAGATGTCTCCATCTCCAAAACTGCCTTGTACTCCCGCATCGGGTCCACCGAGGTGGAGA
AACCCCCAGGCCTTCTGTTCCAGCAGCCAGACCTGGACTCTGCACTCCAGGTTGCCAGAGCAGAGGTCAT
CGCCAAGGAGAGAGAAGTCTCAGAGTGGAGGGATAAATATGAAGAAAGCCGACGGGAAGTGGTGGAAATG
AGGAAAATTGTGGCCGAATATGAGAAGACCATTGCACAGATGATCGAGGACGAACAGAGAGAAAAATCCA
TCTCCCACCAAACTGTACAGCAGCTGGTCCTGGAGAAGGAGCAAGCCCTGGCTGACCTGAACTCTGTGGA
AAAGTCTCTGGCTGACCTCTTCAGGAGATACGAAAAGATGAAGGAGGTCCTGGAAGGTTTTCGAAAGAAT
GAAGAGGTGTTGAAGAAATGTGCGCAGGAGTACCTATCCCGAGTGAAGAAAGAGGAACAGAGGTACCAGG
CCCTGAAGGTGCACGCCGAAGAGAAACTGGACAGAGCCAATGCAGAGATTGCCCAGGTTCGCGGCAAGGC
CCAGCAAGAGCAAGCAGCCTACCAGGCTAGCCTGCGGAAGGAGCAGCTTCGAGTGGATGCTCTGGAAAGA
ACGCTGGAGCAGAAGAATAAAGAGATAGAAGAACTCACCAAGATTTGTGACGAGCTGATCGCCAAGATGG
GAAAAAGCTAA

Translation (1146 aa):
MGNENSTSDHQRTSSVQSPRSLQPPGKSQSLQKQQGDLPGSCAGSIPGTDDVIQPAAPVDPGHPPLADSS
HHGDAVSSVSTHLTVQSASPSAARASPAPLAPEHTASAPSAAGPGVEVTPTASPQHLAKNEPRSSDSEEA
FETPESTTPVKAPPAPPPPPPEVTPEPEVIDPPAPEEPGCISEPPVVVPDGPRSSESVEGSPFRPSHSSS
AVFDEDKPIASSGTYNLDFDSIELVDNFQSLEPCSADSKGQECKVSTRRKSTESVPPSKSTLSRSLSLQA
SDFDGASCPGSPEAGTLTTDACGTGSNSASSTLKRTKKTRPPSLKKKQATKKPTETPPVKETQQEPGEES
PVPSEEHLAPETKTESATPEGAGCTLSDDTPLESPAVPTATCPLTLESAEDVSPLVSGGGRVQNSPPVGR
KSVPLTTASEAVEVTLSDSGGQEDLPAKGLSVRLEFDYSEDKGSWESQQENAPPTKKIGKKPVAKMPLRR
PKMKKTPEKLDNTPASPPRSPTEPSDTPIAKGTYTFDIDKWDDPNFNPFSSTSKMQESPKLSQQSYNFDP
DACEESLDPFKASSKTPSSPSKSPASFEIPASTTEADGDGLNKPAKKKKTPLKTMVEDVMSVCSLFDTFR
VKKSPKRSPLSDPPSQDPTPAATPEAPSAISTVVHATDEEKLAVTSQKWTCMTVDLDADKQDFPQPSDLS
NFVNETKFNSPSEELDYRNSYEIEYMEKLGSSLPQDDDTPKKQALYLMFDTPQESPVKSPPVRMSDSPTP
CSGSSFEDTEALVNAATKLQHPVARGLPSSQEPLLQVPEKPSQKELEAMALGTPAEAIEITAPEGAFASA
DTLLSRLAHPASLCGALGYLEPDLAEKNPPVFAQKLQEELEFAVMRIEALKLARQIALASRSRQDTKREA
AHPPDVSISKTALYSRIGSTEVEKPPGLLFQQPDLDSALQVARAEVIAKEREVSEWRDKYEESRREVVEM
RKIVAEYEKTIAQMIEDEQREKSISHQTVQQLVLEKEQALADLNSVEKSLADLFRRYEKMKEVLEGFRKN
EEVLKKCAQEYLSRVKKEEQRYQALKVHAEEKLDRANAEIAQVRGKAQQEQAAYQASLRKEQLRVDALER
TLEQKNKEIEELTKICDELIAKMGKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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