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Report for CCDS21751.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21751.1 Public Mus musculus 7 Galnt18 23 108 98 CCDS HistoryNCBI Gene:233733Re-query CCDS DB by CCDS ID:21751.1Re-query CCDS DB by GeneID:233733See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21751.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000049430.14 ENSMUSP00000043636.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000049430.14Link to Ensembl Protein Viewer:ENSMUSP00000043636.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000049430Re-query CCDS DB by Protein ID:ENSMUSP00000043636
Original member Current member NCBI NM_173739.4 NP_776100.2 Accepted alive Link to Nucleotide Sequence:NM_173739.4Link to Protein Sequence:NP_776100.2Re-query CCDS DB by Nucleotide ID:NM_173739Re-query CCDS DB by Protein ID:NP_776100Link to BLAST:NP_776100.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_776100.2 622 Q8K1B9 622 100% 0 0

Chromosomal Locations for CCDS 21751.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 111471937 111472083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111485035 111485199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111508053 111508148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111513498 111513635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111519990 111520175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111548631 111548790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111554439 111554636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111556346 111556529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111598957 111599123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111616292 111616484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111779313 111779547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1869 nt):
ATGGTGTGTACCAGGAAGACCAAAACTTTGGTGTCCACTTGCGTGATCCTAAGCGGCATGACCAACATCA
TATGCCTGCTGTACGTGGGCTGGGTCACCAACTACATCGCCAGCGTGTATGTGCGGGGGCAGGAGCCAGT
GCCCGACAAGAAGCTGGAGGAAGATAAAGGGGACACCCTGAAAATTATCGAGCGGCTGGACCACTTGGAG
AATGTCATCAAACAGCATATCCAAGAGGCTCCTGCCAAGCCTGAGGAGGCAGAGGCCGAGCCCTTCACGG
ACTCCTCCCTGTTTGCACACTGGGGGCAGGAGCTCAGCCCGGAAGGCCGGCGTGTGGCCCTGAAGCAGTT
CCAGTACTACGGCTACAACGCCTACCTCAGTGACCGGCTACCCCTCGACCGGCCCCTGCCAGACCTCAGA
CCCAGTGGGTGCCGCAACCTCTCGTTCCCCGACAGCCTACCTGAGGTGAGCATCGTGTTCATCTTCGTCA
ACGAGGCGCTCTCAGTGCTCCTGCGTTCCATCCACTCGGCCATGGAACGCACGCCATCACACCTGCTCAA
GGAGATCATCCTGGTGGACGACAACAGCAGCAACGAGGAGCTCAAAGAAAAGCTGACTGAATATGTGGAC
AAGGTGAACGGCCAGAAGCCAGGCTTCATCAAAGTTGTGCGGCACAGCAAGCAGGAAGGCCTCATCCGCT
CCAGAGTCAGCGGCTGGAGGGCAGCCACAGCCCCTGTGGTGGCACTGTTCGATGCCCACGTGGAGTTCAA
TGTGGGCTGGGCGGAACCAGTCCTCACCCGCATCAAGGAAAACCGGAAACGGATCATTTCACCATCTTTT
GATAACATCAAATATGACAACTTTGAGATAGAAGAGTACCCGCTAGCCGCCCAAGGCTTTGACTGGGAGC
TGTGGTGCCGCTACCTAAACCCACCCAAGGCCTGGTGGAAGCTAGAGAACTCCACAGCCCCAATCAGGAG
CCCTGCCCTCATTGGCTGTTTCATTGTGGACCGGCAGTACTTCGAGGAGATTGGCCTGCTGGACGAAGGC
ATGGAGGTCTATGGAGGGGAGAATGTGGAGCTTGGGATCAGGGTGAGTGAGATTTCTCACACAGGGCTGA
GCTCAGCTCCCATGATGGTATGGCAGTGTGGCGGGAGTGTGGAGGTCCTGCCCTGCTCTCGGATTGCCCA
CATCGAGCGAGCTCACAAGCCCTACACAGAGGACCTCACTGCCCACGTCCGCAGAAATGCCCTCAGGGTA
GCTGAAGTCTGGATGGATGAATTCAAAAGTCATGTCTACATGGCATGGAACATACCACAAGAGGACTCAG
GGATTGACATCGGGGACATCACCGCACGCAAGGCTCTGAGGAAGCAGCTGCAGTGCAAGACCTTCAGGTG
GTACCTGGTCAGTGTGTACCCAGAGATGAGGATGTACTCTGACATTATCGCCTATGGAGTGCTGCAGAAT
TCCCTGAAGACTGATTTGTGTCTTGATCAGGGCCCAGATACAGAGAATGTCCCCATCGTGTACATATGCC
ATGGGATGACACCCCAGAATGTGTACTACACAAGCAGCCAGCAGATCCACGTGGGTATCCTGAGCCCCAC
TGTGGATGACGATGACAACCGGTGTCTGGTGGACGTCAACAGCCGGCCACGTCTCATCGAGTGCAGTTAC
GCCAAGGCCAAGAGGATGAAGCTGCACTGGCAGTTCTCCCAGGGAGGCTCCATCCAGAACCGCAAGTCCA
AGCGCTGCCTGGAGCTGCAAGAGAACAGTGACATGGAGTTTGGTTTCCAGCTGGTGCTTCAGAAGTGCTC
GGGACAACACTGGACTATCACCAATGTCCTGAGGAGCCTGGTGTCCTGA

Translation (622 aa):
MVCTRKTKTLVSTCVILSGMTNIICLLYVGWVTNYIASVYVRGQEPVPDKKLEEDKGDTLKIIERLDHLE
NVIKQHIQEAPAKPEEAEAEPFTDSSLFAHWGQELSPEGRRVALKQFQYYGYNAYLSDRLPLDRPLPDLR
PSGCRNLSFPDSLPEVSIVFIFVNEALSVLLRSIHSAMERTPSHLLKEIILVDDNSSNEELKEKLTEYVD
KVNGQKPGFIKVVRHSKQEGLIRSRVSGWRAATAPVVALFDAHVEFNVGWAEPVLTRIKENRKRIISPSF
DNIKYDNFEIEEYPLAAQGFDWELWCRYLNPPKAWWKLENSTAPIRSPALIGCFIVDRQYFEEIGLLDEG
MEVYGGENVELGIRVSEISHTGLSSAPMMVWQCGGSVEVLPCSRIAHIERAHKPYTEDLTAHVRRNALRV
AEVWMDEFKSHVYMAWNIPQEDSGIDIGDITARKALRKQLQCKTFRWYLVSVYPEMRMYSDIIAYGVLQN
SLKTDLCLDQGPDTENVPIVYICHGMTPQNVYYTSSQQIHVGILSPTVDDDDNRCLVDVNSRPRLIECSY
AKAKRMKLHWQFSQGGSIQNRKSKRCLELQENSDMEFGFQLVLQKCSGQHWTITNVLRSLVS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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