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Report for CCDS1974.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1974.1 Public Homo sapiens 2 CAPG 24 110 108 CCDS HistoryNCBI Gene:822Re-query CCDS DB by CCDS ID:1974.1Re-query CCDS DB by GeneID:822See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1974.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263867.9 ENSP00000263867.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000263867.9Link to Ensembl Protein Viewer:ENSP00000263867.4Re-query CCDS DB by Nucleotide ID:ENST00000263867Re-query CCDS DB by Protein ID:ENSP00000263867
Original member Current member EBI ENST00000409670.5 ENSP00000386315.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409670.5Link to Ensembl Protein Viewer:ENSP00000386315.1Re-query CCDS DB by Nucleotide ID:ENST00000409670Re-query CCDS DB by Protein ID:ENSP00000386315
Original member Current member EBI ENST00000409724.5 ENSP00000386965.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409724.5Link to Ensembl Protein Viewer:ENSP00000386965.1Re-query CCDS DB by Nucleotide ID:ENST00000409724Re-query CCDS DB by Protein ID:ENSP00000386965
Original member Current member NCBI NM_001256139.2 NP_001243068.1 Accepted alive Link to Nucleotide Sequence:NM_001256139.2Link to Protein Sequence:NP_001243068.1Re-query CCDS DB by Nucleotide ID:NM_001256139Re-query CCDS DB by Protein ID:NP_001243068Link to BLAST:NP_001243068.1
Original member Current member NCBI NM_001320732.2 NP_001307661.1 Accepted alive Link to Nucleotide Sequence:NM_001320732.2Link to Protein Sequence:NP_001307661.1Re-query CCDS DB by Nucleotide ID:NM_001320732Re-query CCDS DB by Protein ID:NP_001307661Link to BLAST:NP_001307661.1
Original member Current member NCBI NM_001320733.2 NP_001307662.1 Accepted alive Link to Nucleotide Sequence:NM_001320733.2Link to Protein Sequence:NP_001307662.1Re-query CCDS DB by Nucleotide ID:NM_001320733Re-query CCDS DB by Protein ID:NP_001307662Link to BLAST:NP_001307662.1
Original member Current member NCBI NM_001747.4 NP_001738.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001747.4Link to Protein Sequence:NP_001738.2Re-query CCDS DB by Nucleotide ID:NM_001747Re-query CCDS DB by Protein ID:NP_001738Link to BLAST:NP_001738.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243068.1 348 P40121-1 348 100% 0 0
NP_001307661.1 348 P40121-1 348 100% 0 0
NP_001307662.1 348 P40121-1 348 100% 0 0
NP_001738.2 348 P40121-1 348 100% 0 0

Chromosomal Locations for CCDS 1974.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 85394893 85394958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85395538 85395626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85398020 85398152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85398690 85398782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85399136 85399285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85401165 85401329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85401529 85401683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85401785 85401957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85402123 85402145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1047 nt):
ATGTACACAGCCATTCCCCAGAGTGGCTCTCCATTCCCAGGCTCAGTGCAGGATCCAGGCCTGCATGTGT
GGCGGGTGGAGAAGCTGAAGCCGGTGCCTGTGGCGCAAGAGAACCAGGGCGTCTTCTTCTCGGGGGACTC
CTACCTAGTGCTGCACAATGGCCCAGAAGAGGTTTCCCATCTGCACCTGTGGATAGGCCAGCAGTCATCC
CGGGATGAGCAGGGGGCCTGTGCCGTGCTGGCTGTGCACCTCAACACGCTGCTGGGAGAGCGGCCTGTGC
AGCACCGCGAGGTGCAGGGCAATGAGTCTGACCTCTTCATGAGCTACTTCCCACGGGGCCTCAAGTACCA
GGAAGGTGGTGTGGAGTCAGCATTTCACAAGACCTCCACAGGAGCCCCAGCTGCCATCAAGAAACTCTAC
CAGGTGAAGGGGAAGAAGAACATCCGTGCCACCGAGCGGGCACTGAACTGGGACAGCTTCAACACTGGGG
ACTGCTTCATCCTGGACCTGGGCCAGAACATCTTCGCCTGGTGTGGTGGAAAGTCCAACATCCTGGAACG
CAACAAGGCGAGGGACCTGGCCCTGGCCATCCGGGACAGTGAGCGACAGGGCAAGGCCCAGGTGGAGATT
GTCACTGATGGGGAGGAGCCTGCTGAGATGATCCAGGTCCTGGGCCCCAAGCCTGCTCTGAAGGAGGGCA
ACCCTGAGGAAGACCTCACAGCTGACAAGGCAAATGCCCAGGCCGCAGCTCTGTATAAGGTCTCTGATGC
CACTGGACAGATGAACCTGACCAAGGTGGCTGACTCCAGCCCATTTGCCCTTGAACTGCTGATATCTGAT
GACTGCTTTGTGCTGGACAACGGGCTCTGTGGCAAGATCTATATCTGGAAGGGGCGAAAAGCGAATGAGA
AGGAGCGGCAGGCAGCCCTGCAGGTGGCCGAGGGCTTCATCTCGCGCATGCAGTACGCCCCGAACACTCA
GGTGGAGATTCTGCCTCAGGGCCATGAGAGTCCCATCTTCAAGCAATTTTTCAAGGACTGGAAATGA

Translation (348 aa):
MYTAIPQSGSPFPGSVQDPGLHVWRVEKLKPVPVAQENQGVFFSGDSYLVLHNGPEEVSHLHLWIGQQSS
RDEQGACAVLAVHLNTLLGERPVQHREVQGNESDLFMSYFPRGLKYQEGGVESAFHKTSTGAPAAIKKLY
QVKGKKNIRATERALNWDSFNTGDCFILDLGQNIFAWCGGKSNILERNKARDLALAIRDSERQGKAQVEI
VTDGEEPAEMIQVLGPKPALKEGNPEEDLTADKANAQAAALYKVSDATGQMNLTKVADSSPFALELLISD
DCFVLDNGLCGKIYIWKGRKANEKERQAALQVAEGFISRMQYAPNTQVEILPQGHESPIFKQFFKDWK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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