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Report for CCDS1897.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1897.2 Public Homo sapiens 2 ASPRV1 24 110 108 CCDS HistoryNCBI Gene:151516Re-query CCDS DB by CCDS ID:1897.2Re-query CCDS DB by GeneID:151516See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 1897.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000320256.6 ENSP00000315383.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000320256.6Link to Ensembl Protein Viewer:ENSP00000315383.5Re-query CCDS DB by Nucleotide ID:ENST00000320256Re-query CCDS DB by Protein ID:ENSP00000315383
Original member Current member NCBI NM_152792.4 NP_690005.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152792.4Link to Protein Sequence:NP_690005.3Re-query CCDS DB by Nucleotide ID:NM_152792Re-query CCDS DB by Protein ID:NP_690005Link to BLAST:NP_690005.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_690005.3 259 Q53RT3-2 259 100% 0 0

Chromosomal Locations for CCDS 1897.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 69960657 69961436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (780 nt):
ATGGCCGGGAGCGGAGCCAGGAGTGAGGAAGGCCGCCGGCAGCATGCCTTCGTCCCGGAACCTTTTGATG
GGGCCAATGTCGTCCCAAACCTCTGGCTGCACAGCTTTGAAGTCATCAATGACCTCAACCATTGGGACCA
TATCACCAAGCTAAGGTTCCTGAAAGAGTCCCTCAGAGGAGAGGCCCTGGGTGTCTACAATAGGCTCAGT
CCCCAGGACCAGGGAGACTATGGGACTGTGAAAGAGGCCCTCCTGAAGGCCTTTGGGGTCCCTGGGGCTG
CCCCCAGCCACCTGCCCAAAGAGATCGTCTTTGCCAACAGCATGGGTAAGGGCTACTATCTCAAGGGGAA
GATTGGCAAAGTGCCCGTGAGGTTCCTGGTGGACTCTGGGGCCCAGGTCTCTGTGGTCCACCCAAACTTG
TGGGAGGAGGTCACTGATGGCGATCTGGACACCCTGCAGCCCTTTGAGAATGTGGTAAAGGTGGCCAATG
GTGCTGAAATGAAGATCCTGGGTGTCTGGGATACAGCGGTGTCCCTAGGCAAGCTGAAGCTGAAGGCACA
GTTCCTAGTGGCCAATGCGAGTGCCGAGGAAGCCATCATTGGCACTGATGTGCTCCAGGACCACAATGCT
ATCCTGGACTTTGAGCACCGCACATGCACCCTGAAAGGGAAGAAGTTTCGCCTTCTGCCTGTGGGAGGGT
CCCTGGAAGATGAGTTTGACCTGGAGCTCATAGAGGAGGACCCCTCCTCAGAAGAAGGGCGGCAGGAGCT
ATCCCACTGA

Translation (259 aa):
MAGSGARSEEGRRQHAFVPEPFDGANVVPNLWLHSFEVINDLNHWDHITKLRFLKESLRGEALGVYNRLS
PQDQGDYGTVKEALLKAFGVPGAAPSHLPKEIVFANSMGKGYYLKGKIGKVPVRFLVDSGAQVSVVHPNL
WEEVTDGDLDTLQPFENVVKVANGAEMKILGVWDTAVSLGKLKLKAQFLVANASAEEAIIGTDVLQDHNA
ILDFEHRTCTLKGKKFRLLPVGGSLEDEFDLELIEEDPSSEEGRQELSH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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