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Report for CCDS1648.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1648.1 Public Homo sapiens 2 RPS7 24 110 108 CCDS HistoryNCBI Gene:6201Re-query CCDS DB by CCDS ID:1648.1Re-query CCDS DB by GeneID:6201See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1648.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000403564.5 ENSP00000385018.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000403564.5Link to Ensembl Protein Viewer:ENSP00000385018.1Re-query CCDS DB by Nucleotide ID:ENST00000403564Re-query CCDS DB by Protein ID:ENSP00000385018
Original member Current member EBI ENST00000406376.1 ENSP00000385286.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000406376.1Link to Ensembl Protein Viewer:ENSP00000385286.1Re-query CCDS DB by Nucleotide ID:ENST00000406376Re-query CCDS DB by Protein ID:ENSP00000385286
Original member Current member EBI ENST00000462576.5 ENSP00000495273.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000462576.5Link to Ensembl Protein Viewer:ENSP00000495273.1Re-query CCDS DB by Nucleotide ID:ENST00000462576Re-query CCDS DB by Protein ID:ENSP00000495273
Original member Current member EBI ENST00000646909.1 ENSP00000496654.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000646909.1Link to Ensembl Protein Viewer:ENSP00000496654.1Re-query CCDS DB by Nucleotide ID:ENST00000646909Re-query CCDS DB by Protein ID:ENSP00000496654
Original member Current member EBI ENST00000645674.2 ENSP00000496757.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000645674.2Link to Ensembl Protein Viewer:ENSP00000496757.1Re-query CCDS DB by Nucleotide ID:ENST00000645674Re-query CCDS DB by Protein ID:ENSP00000496757
Original member Current member NCBI NM_001011.4 NP_001002.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001011.4Link to Protein Sequence:NP_001002.1Re-query CCDS DB by Nucleotide ID:NM_001011Re-query CCDS DB by Protein ID:NP_001002Link to BLAST:NP_001002.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001002.1 194 P62081 194 100% 0 0

Chromosomal Locations for CCDS 1648.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 3575610 3575684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 3575817 3575888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 3576487 3576630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 3577710 3577774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 3580110 3580260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 3580805 3580882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (585 nt):
ATGTTCAGTTCGAGCGCCAAGATCGTGAAGCCCAATGGCGAGAAGCCGGACGAGTTCGAGTCCGGCATCT
CCCAGGCTCTTCTGGAGCTGGAGATGAACTCGGACCTCAAGGCTCAGCTCAGGGAGCTGAATATTACGGC
AGCTAAGGAAATTGAAGTTGGTGGTGGTCGGAAAGCTATCATAATCTTTGTTCCCGTTCCTCAACTGAAA
TCTTTCCAGAAAATCCAAGTCCGGCTAGTACGCGAATTGGAGAAAAAGTTCAGTGGGAAGCATGTCGTCT
TTATCGCTCAGAGGAGAATTCTGCCTAAGCCAACTCGAAAAAGCCGTACAAAAAATAAGCAAAAGCGTCC
CAGGAGCCGTACTCTGACAGCTGTGCACGATGCCATCCTTGAGGACTTGGTCTTCCCAAGCGAAATTGTG
GGCAAGAGAATCCGCGTCAAACTAGATGGCAGCCGGCTCATAAAGGTTCATTTGGACAAAGCACAGCAGA
ACAATGTGGAACACAAGGTTGAAACTTTTTCTGGTGTCTATAAGAAGCTCACGGGCAAGGATGTTAATTT
TGAATTCCCAGAGTTTCAATTGTAA

Translation (194 aa):
MFSSSAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLK
SFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIV
GKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPEFQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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