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Report for CCDS16181.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
16181.1 |
Public |
Mus musculus |
2 |
Itgav |
23 |
108 |
98 |
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Public Note for CCDS 16181.1 |
The coding region has been updated to represent a CDS sequence that is better supported by available transcript data and the reference genome sequence. The protein length is unchanged. |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration) Sequence IDs included in CCDS 16181.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000028499.10 |
ENSMUSP00000028499.4 |
Accepted |
alive |
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NCBI |
NM_008402.3 |
NP_032428.2 |
Updated |
not alive |
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NCBI |
NM_008402.4 |
NP_032428.2 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_032428.2 |
1044 |
P43406 |
1044 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 16181.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3135 nt): ATGGCTGCTCCCGGGCGCCTGCTGCTACGCCCTCGCCCCGGCGGCCTCCTGCTGCTGCTGCCGGGTCTCC TGCTGCCCCTCGCCGACGCCTTCAACCTGGACGTCGAAAGTCCCGCCGAGTATGCGGGTCCCGAGGGAAG TTACTTCGGATTCGCCGTGGACTTCTTCGAGCCCAGCACGTCCTCCAGGATGTTTCTCCTGGTGGGAGCC CCCAAAGCGAACACGACCCAGCCTGGGATTGTAGAAGGAGGGCAAGTTCTCAAATGTGAATGCTCATCCA GCCGCCGGTGCCAGCCCATTGAGTTTGATTCAACAGGCAATCGAGATTATGCCAAAGATGACCCACTGGA GTTTAAGTCCCACCAGTGGTTTGGAGCCTCTGTGAGGTCAAAGCAGGATAAAATCTTGGCCTGTGCTCCA TTGTACCACTGGAGGACTGAGATGAAGCAGGAGAGAGAGCCAGTTGGAACCTGCTTTCTTCAGGACGGCA CAAAGACCGTTGAGTATGCTCCATGCAGGTCAAAAAATATTGATGCTGATGGCCAGGGATTTTGTCAAGG AGGATTCAGCATTGATTTTACTAAAGCTGACAGAGTACTTCTCGGTGGTCCTGGTAGCTTTTATTGGCAA GGTCAGCTCATTTCGGACCAAGTGGCAGAAATCATATCTAAATATGACCCAAATGTCTACAGCATCAAAT ATAATAACCAATTAGCAACACGGACTGCACAAGCAATTTTTGATGACAGTTATTTGGGTTACTCTGTGGC CGTGGGAGACTTCAATGGTGACGGCATTGAAGATTTTGTCTCAGGAGTTCCAAGAGCAGCAAGGACTTTG GGAATGGTTTATATTTATGATGGGAAAAATATGTCCTCTTTACACAATTTTACTGGTGAACAGATGGCTG CGTATTTTGGATTTTCTGTAGCTGCTACTGACATTAATGGGGATGATTACGCAGATGTGTTTATTGGAGC CCCCCTGTTCATGGACCGAGGTTCCGATGGGAAACTCCAGGAGGTTGGCCAGGTCTCAGTGTCTCTGCAG AGAGCAGTGGGAGACTTCCAGACTACAAAGCTGAACGGCTTTGAGGTTTTTGCCAGGTTTGGAAGTGCCA TAGCTCCATTGGGAGACCTGGACCAGGATGGCTTCAATGATATTGCAATTGCTGCTCCCTATGGTGGTGA AGATAAGAAGGGACTTGTTTATATCTTCAATGGAAGGTCCACAGGCTTGAATTCGGTGCCATCTCAAATC CTCGAGGGGCAGTGGGCTGCTCAGAGCATGCCCCCAAGCTTTGGCTATTCAATGAAGGGAGCTACAGATG TAGACAGGAATGGATATCCAGACTTAGTTGTAGGAGCTTTTGGTGTGGATCGAGCTGTCTTATACAGAGC CAGACCCGTTGTCACTGTAAATGCTGGCCTTGAAGTGTACCCTAGCATTTTAAATCAAGACAATAAGATC TGCCCGTTGCCTGGGACAGCTCTCAAGGTTTCCTGTTTTAATGTCAGATTCTGCTTAAAGGCAGATGGCA AGGGAACCCTTCCTCGGAAGCTCCACTTCCAGGTGGAGCTTCTACTGGATAAACTCAAGCAGAAGGGAGC CATCCGACGAGCACTGTTTCTCCATAACAGGTCCCCGGTCCACTCCAAGACCATGACTGTTTTCAGGGGG GGACAGATGCAGTGTGAGGAACTGGTCGCCTATCTTCGGGATGAATCTGAATTTAGAGACAAGCTCACTC CCATCACCATTTTCATGGAGTATCGGTTGGACCAGAGAACGGCTGCTGATGCCACAGGCTTGCAGCCCAT CCTGAACCAGTTCACTCCGGCCAACGTCAGTCGGCAGGCTCATATTCTACTTGACTGTGGTGAAGACAAT GTCTGTAAACCTAAATTGGAAGTTTCTGTAAATAGTGATCAAAAGAAGATCTATATTGGGGACGACAACC CTCTGACACTGACTGTGAAGGCGCAGAATCAAGGGGAAGGCGCCTATGAAGCTGAGCTCATCGTTTCTAT CCCACCGCAGGCTGACTTCATCGGGGTTGTCCGGAACAACGAAGCCTTAGCAAGACTGTCCTGTGCATTT AAGACAGAAAACCAAACTCGGCAGGTGGTGTGCGACCTTGGAAACCCGATGAAGGCTGGAACTCAACTGC TCGCTGGTCTTCGTTTCAGCGTGCACCAGCAGTCAGAGATGGATACTTCTGTGAAGTTTGACTTGAAAAT CCAGAGCTCTAATTCTTTTGACAATGTAAGTCCAGTTGTGTCTTACAAGGTTGACCTCGCCGTTTTGGCT GCTGTGGAGATAAGAGGAGTTTCAAGTCCAGATCATATCTTTCTTCCAATTCCAAATTGGGAGTACAAGG AAAACCCTGAGACTGAAGAAGACGTTGGGCCTATTGTTCAGCACATATATGAGCTGAGAAACAATGGTCC AAGTTCATTCAGCAAGGCAATTCTAAATCTCCAGTGGCCTTACAAATACAACAACAACACTCTGTTGTAC ATTCTTCATTACGACATTGACGGGCCAATGAACTGCACGGCAGATACAGAGATCAACCCTTTGAGAATCA AGACACCCGAAAAGAATGACACAGCGGCGGCGGGACAGGGAGAAAGGAATCATCTCATCACCAAGCGGGA TCTCACCCTCAGAGAGGGAGATGTTCACACTTTGGGCTGTGGAATCGCCAAGTGCTTGCAGATCACCTGC CAGGTTGGTCGACTGGATAGAGGCAAGAGCGCAATCCTGTACGTGAAATCCCTGCTGTGGACCGAGACGT TCATGAACAAGGAGAACCAGAACCATTCCTATTCGCTGAAGTCATCTGCTTCCTTTAATATCATAGAATT CCCTTACAAGAACCTGCCGATCGAGGATCTCTTCAACTCTACACTAGTCACCACTAACATCACCTGGGGC ATTCAGCCGGCGCCCATGCCTGTGCCTGTGTGGGTGATCATCTTGGCAGTTCTCGCAGGGCTGCTGCTAC TGGCTGTGTTGGTATTTGTAATGTACAGGATGGGCTTTTTCAAACGTGTCCGACCACCTCAAGAAGAGCA AGAAAGAGAACAGCTTCAGCCTCATGAGAATGGCGAAGGAAACTCTGAAACCTAA
Translation (1044 aa): MAAPGRLLLRPRPGGLLLLLPGLLLPLADAFNLDVESPAEYAGPEGSYFGFAVDFFEPSTSSRMFLLVGA PKANTTQPGIVEGGQVLKCECSSSRRCQPIEFDSTGNRDYAKDDPLEFKSHQWFGASVRSKQDKILACAP LYHWRTEMKQEREPVGTCFLQDGTKTVEYAPCRSKNIDADGQGFCQGGFSIDFTKADRVLLGGPGSFYWQ GQLISDQVAEIISKYDPNVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIEDFVSGVPRAARTL GMVYIYDGKNMSSLHNFTGEQMAAYFGFSVAATDINGDDYADVFIGAPLFMDRGSDGKLQEVGQVSVSLQ RAVGDFQTTKLNGFEVFARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGLVYIFNGRSTGLNSVPSQI LEGQWAAQSMPPSFGYSMKGATDVDRNGYPDLVVGAFGVDRAVLYRARPVVTVNAGLEVYPSILNQDNKI CPLPGTALKVSCFNVRFCLKADGKGTLPRKLHFQVELLLDKLKQKGAIRRALFLHNRSPVHSKTMTVFRG GQMQCEELVAYLRDESEFRDKLTPITIFMEYRLDQRTAADATGLQPILNQFTPANVSRQAHILLDCGEDN VCKPKLEVSVNSDQKKIYIGDDNPLTLTVKAQNQGEGAYEAELIVSIPPQADFIGVVRNNEALARLSCAF KTENQTRQVVCDLGNPMKAGTQLLAGLRFSVHQQSEMDTSVKFDLKIQSSNSFDNVSPVVSYKVDLAVLA AVEIRGVSSPDHIFLPIPNWEYKENPETEEDVGPIVQHIYELRNNGPSSFSKAILNLQWPYKYNNNTLLY ILHYDIDGPMNCTADTEINPLRIKTPEKNDTAAAGQGERNHLITKRDLTLREGDVHTLGCGIAKCLQITC QVGRLDRGKSAILYVKSLLWTETFMNKENQNHSYSLKSSASFNIIEFPYKNLPIEDLFNSTLVTTNITWG IQPAPMPVPVWVIILAVLAGLLLLAVLVFVMYRMGFFKRVRPPQEEQEREQLQPHENGEGNSET
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